RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 HBZP02008 142 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 HIST1H1BP16401 226 aaKnown RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 OR13C9Q8NGT0 318 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 PRSS27Q9BQR3 290 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CLN8Q9UBY8 286 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 FAM171A2A8MVW0 826 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SYNGR2O43760 224 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 BMP5P22003 454 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF260Q3ZCT1 412 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 OR10G8Q8NGN5 311 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CCR2P41597 374 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CAV3P56539 151 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 PAPPA-AS1Q5QFB9 102 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 C6orf15Q6UXA7 325 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 PUS1Q9Y606 427 aaKnown RBP eCLIP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CA7P43166 264 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 PRRT4C9JH25 899 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 TXNL1O43396 289 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SLC2A10O95528 541 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 FCGR3AP08637 254 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 ETV3LQ6ZN32 361 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 RBM45Q8IUH3 476 aaKnown RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 HIST1H2BAQ96A08 127 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SRD5A3Q9H8P0 318 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 TECRQ9NZ01 308 aaKnown RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SLURP2P0DP57 97 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM240Q5SV17 173 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SIT1Q9Y3P8 196 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 A0A0B4J203 849 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM202A6NGA9 273 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 B2MP61769 119 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM99Q8N816 258 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 TRBV23-1A0A0A0MS06 115 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 LINC01553A4QN01 128 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 TRAPPC6AO75865 159 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CTSOP43234 321 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CCL7P80098 99 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 OR11H7Q8NGC8 314 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 OR5R1Q8NH85 324 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SRSF8Q9BRL6 282 aaKnown RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF2Q9BSG1 426 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 UBE2G2P60604 165 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 UBR2Q8IWV8 1755 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 DBX2Q6ZNG2 339 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 FAM57BQ71RH2 274 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 SCRG1O75711 98 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 FGF12P61328 243 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CCDC144NLQ6NUI1 221 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 Q8NFD4 153 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 C7orf77A4D0Y5 90 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 KIR2DL1P43626 348 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 RPS26P11Q5JNZ5 115 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 DHRS13Q6UX07 377 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 KCNS2Q9ULS6 477 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CRYM-AS1A6NIL9 109 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 ARF6P62330 175 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 IFI44Q8TCB0 444 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 TOGARAM1Q9Y4F4 1720 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 A0A1W2PPK0 400 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 CEBPBP17676 345 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 MAS1LP35410 378 aa4.36□□□□□ -1.71
PCDH9-201ENST00000377861 HEYLQ9NQ87 328 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-201ENST00000377861 REG1AP05451 166 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 RPS20P60866 119 aaKnown RBP4.35□□□□□ -1.71
PCDH9-201ENST00000377861 ZDHHC23Q8IYP9 409 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 ATOH1Q92858 354 aaPredicted RBP4.35□□□□□ -1.71
PCDH9-201ENST00000377861 CNTD2Q9H8S5 307 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 SNRNP70P08621 437 aaKnown RBP4.35□□□□□ -1.71
PCDH9-201ENST00000377861 GPR12P47775 334 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM268Q5VZI3 342 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 PLCXD3Q63HM9 321 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 OR4B1Q8NGF8 309 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 FAM213BQ8TBF2 198 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 GPR35Q9HC97 309 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF44P15621 663 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 MEF2BQ02080 365 aaPredicted RBP4.35□□□□□ -1.71
PCDH9-201ENST00000377861 EBPQ15125 230 aaKnown RBP4.35□□□□□ -1.71
PCDH9-201ENST00000377861 M0QYG6 137 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 LRRC37A5PQ49AS3 106 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 IER5LQ5T953 404 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 SOD3P08294 240 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 NCR3LG1Q68D85 454 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 STPG3Q8N7X2 389 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 H7C1C5 153 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 LANCL1O43813 399 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 NPIPB7O75200 414 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 THNSL2Q86YJ6 484 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 SIRT6Q8N6T7 355 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 SMPXQ9UHP9 88 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 SSTR4P31391 388 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 CFHR2P36980 270 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 LYSMD4Q5XG99 296 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 CFAP77Q6ZQR2 320 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 TRAV30A0A087WSZ9 112 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 TRBV11-1A0A0K0K1C0 115 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 LCN10Q6JVE6 187 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 NRIP2Q9BQI9 281 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 FGF22Q9HCT0 170 aa4.35□□□□□ -1.71
PCDH9-201ENST00000377861 TNFRSF1BP20333 461 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms