RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PRKYO43930 277 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 ARG1P05089 322 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 GLRA1P23415 457 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 BNIP1Q12981 228 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 TMEM200BQ69YZ2 307 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 ZFAND6Q6FIF0 208 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 OR51E1Q8TCB6 317 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 MALSU1Q96EH3 234 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 FGF23Q9GZV9 251 aaPredicted RBP12.67□□□□□ -0.38
DDX55-202ENST00000354291 OR51I2Q9H344 312 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 GPR84Q9NQS5 396 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 NLKQ9UBE8 527 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 NUFIP1Q9UHK0 495 aaKnown RBP12.67□□□□□ -0.38
DDX55-202ENST00000354291 ENOPH1Q9UHY7 261 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 IKZF2Q9UKS7 526 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 CSMD3Q7Z407 3707 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 hCG_1809904A0A1W2PP81 198 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 A0A1W2PPE2 198 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 A0A1W2PPH5 198 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 A0A1W2PR64 198 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 A0A1W2PRV1 198 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 RAMP3O60896 148 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 IGLV3-1P01715 115 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 JUNBP17275 347 aaPredicted RBP12.66□□□□□ -0.38
DDX55-202ENST00000354291 EFNB1P98172 346 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 ATP6AP1Q15904 470 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 CEP78Q5JTW2 689 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 NXNL2Q5VZ03 156 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 ETV3LQ6ZN32 361 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 MOB3CQ70IA8 216 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 ZDHHC13Q8IUH4 622 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 C11orf42Q8N5U0 333 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 TCEANCQ8N8B7 351 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 OR4M1Q8NGD0 313 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 OR51D1Q8NGF3 324 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 TMEM163Q8TC26 289 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 FOXRED1Q96CU9 486 aaPredicted RBP12.66□□□□□ -0.38
DDX55-202ENST00000354291 RASL12Q9NYN1 266 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 ENPP5Q9UJA9 477 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 COPS3Q9UNS2 423 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 PIGLQ9Y2B2 252 aa12.66□□□□□ -0.38
DDX55-202ENST00000354291 IGKV1D-17A0A075B6S4 117 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 H3BUI4 141 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 DHRS3O75911 302 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 ATP5HO75947 161 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 NRASP01111 189 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 LPLP06858 475 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 CCL3L1P16619 93 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 FASP25445 335 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 THBS3P49746 956 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 CXCR4P61073 352 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 RPL31P62899 125 aaKnown RBP12.65□□□□□ -0.38
DDX55-202ENST00000354291 AADACL4Q5VUY2 407 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 SLX4IPQ5VYV7 408 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 KDM4DQ6B0I6 523 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 ZNF322Q6U7Q0 402 aaPredicted RBP12.65□□□□□ -0.38
DDX55-202ENST00000354291 SLC35F2Q8IXU6 374 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 AQP3Q92482 292 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 RCHY1Q96PM5 261 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 MOB1AQ9H8S9 216 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 CLN6Q9NWW5 311 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 AP4S1Q9Y587 144 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 HILPDAQ9Y5L2 63 aa12.65□□□□□ -0.38
DDX55-202ENST00000354291 ZAR1LA6NP61 321 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 PRR32B1ATL7 298 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 ZNF670-ZNF695F2Z2N8 137 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 LOC110117498-PIK3R3F6TDL0 507 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 MITFO75030 526 aaPredicted RBP12.64□□□□□ -0.39
DDX55-202ENST00000354291 TTRP02766 147 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 PSG2P11465 335 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 CEBPDP49716 269 aaPredicted RBP12.64□□□□□ -0.39
DDX55-202ENST00000354291 OR12D2P58182 307 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 SLC34A1Q06495 639 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 DYNC1I2Q13409 638 aaKnown RBP12.64□□□□□ -0.39
DDX55-202ENST00000354291 LDLRAD2Q5SZI1 272 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 ZNF684Q5T5D7 378 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 PLCXD3Q63HM9 321 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 C12orf73Q69YU5 71 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 HAGHLQ6PII5 290 aaPredicted RBP12.64□□□□□ -0.39
DDX55-202ENST00000354291 BCDIN3DQ7Z5W3 292 aaKnown RBP12.64□□□□□ -0.39
DDX55-202ENST00000354291 GID4Q8IVV7 300 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 APOL4Q9BPW4 351 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 TTTY10Q9BZA0 68 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 ADGRL4Q9HBW9 690 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 USE1Q9NZ43 259 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.64□□□□□ -0.39
DDX55-202ENST00000354291 GTF2A1LQ9UNN4 478 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 TBL2Q9Y4P3 447 aaKnown RBP12.64□□□□□ -0.39
DDX55-202ENST00000354291 R4GMQ9 66 aa12.64□□□□□ -0.39
DDX55-202ENST00000354291 STARD9Q9P2P6 4700 aa12.63□□□□□ -0.39
DDX55-202ENST00000354291 DLGAP1O14490 977 aa12.63□□□□□ -0.39
DDX55-202ENST00000354291 SRSF10O75494 262 aaKnown RBP12.63□□□□□ -0.39
DDX55-202ENST00000354291 FCGR1AP12314 374 aa12.63□□□□□ -0.39
DDX55-202ENST00000354291 EPHA2P29317 976 aa12.63□□□□□ -0.39
DDX55-202ENST00000354291 MFGE8Q08431 387 aaPredicted RBP12.63□□□□□ -0.39
DDX55-202ENST00000354291 ABCA11PQ4W5N1 156 aa12.63□□□□□ -0.39
DDX55-202ENST00000354291 CLVS2Q5SYC1 327 aa12.63□□□□□ -0.39
DDX55-202ENST00000354291 BCL2L15Q5TBC7 163 aa12.63□□□□□ -0.39
DDX55-202ENST00000354291 C1orf146Q5VVC0 180 aa12.63□□□□□ -0.39
DDX55-202ENST00000354291 ZNF573Q86YE8 665 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms