RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SPATA46Q5T0L3 261 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 HES5Q5TA89 166 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 UQCC3Q6UW78 93 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 IZUMO1Q8IYV9 350 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 CCDC54Q8NEL0 328 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 PXT1Q8NFP0 134 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 C10orf35Q96D05 121 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 MRPS24Q96EL2 167 aaKnown RBP12.61□□□□□ -0.39
CXCL12-201ENST00000343575 CKLFQ9UBR5 152 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 NDRG3Q9UGV2 375 aa12.61□□□□□ -0.39
CXCL12-201ENST00000343575 ERRFI1Q9UJM3 462 aaPredicted RBP12.61□□□□□ -0.39
CXCL12-201ENST00000343575 J3QW42 95 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 LILRA1O75019 489 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 RBBP9O75884 186 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 ANXA7P20073 488 aaKnown RBP12.6□□□□□ -0.39
CXCL12-201ENST00000343575 HOXA1P49639 335 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-201ENST00000343575 PPP1CBP62140 327 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 FGL1Q08830 312 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 C4orf17Q53FE4 359 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 ZNF660Q6AZW8 331 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-201ENST00000343575 PGAP1Q75T13 922 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 ZNF843Q8N446 348 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 OR2AK2Q8NG84 335 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 OR56B2PQ8NGI1 322 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 SYNPRQ8TBG9 265 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 CCDC107Q8WV48 283 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 SLC25A28Q96A46 364 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 PHYHIPLQ96FC7 376 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 WFIKKN1Q96NZ8 548 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 OR2J1Q9GZK6 312 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 TMEM138Q9NPI0 162 aa12.6□□□□□ -0.39
CXCL12-201ENST00000343575 MRPL15Q9P015 296 aaKnown RBP12.6□□□□□ -0.39
CXCL12-201ENST00000343575 CGGBP1Q9UFW8 167 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-201ENST00000343575 FXYD6-FXYD2A0A087WZ82 144 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 M0R1B8 84 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 DNASE2O00115 360 aaPredicted RBP12.59□□□□□ -0.39
CXCL12-201ENST00000343575 MELTFP08582 738 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 H2AFB1P0C5Y9 115 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 BDKRB2P30411 391 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 TFF3Q07654 80 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 SNTB1Q13884 538 aaKnown RBP12.59□□□□□ -0.39
CXCL12-201ENST00000343575 FBXW12Q6X9E4 464 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 PP6455Q8WZ26 134 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 MARS2Q96GW9 593 aaKnown RBP12.59□□□□□ -0.39
CXCL12-201ENST00000343575 SPACA5Q96QH8 159 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
CXCL12-201ENST00000343575 FXYD6Q9H0Q3 95 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 KLK11Q9UBX7 282 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 PURGQ9UJV8 347 aaKnown RBP12.59□□□□□ -0.39
CXCL12-201ENST00000343575 RFPL4AA6NLU0 287 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 RFPL4AL1F8VTS6 287 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 H7C417 338 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 APOC3P02656 99 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 TAS2R20P59543 309 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 MALLQ13021 153 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 MSMPQ1L6U9 139 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 ALKBH6Q3KRA9 238 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 CLVS2Q5SYC1 327 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 SLC25A40Q8TBP6 338 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 MARC2Q969Z3 335 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 GINS4Q9BRT9 223 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 MFFQ9GZY8 342 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 MTFP1Q9UDX5 166 aa12.59□□□□□ -0.39
CXCL12-201ENST00000343575 SPTBN1Q01082 2364 aaKnown RBP12.58□□□□□ -0.4
CXCL12-201ENST00000343575 MEGF11A6BM72 1044 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 CD300LBA8K4G0 201 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 SLC17A2O00624 439 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 XRCC3O43542 346 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 PRF1P14222 555 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 MPV17P39210 176 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 CBX5P45973 191 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 PLA2G7Q13093 441 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 C1orf100Q5SVJ3 147 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 LPCAT3Q6P1A2 487 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 MTFR2Q6P444 385 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 MRPL21Q7Z2W9 205 aaKnown RBP12.58□□□□□ -0.4
CXCL12-201ENST00000343575 OR4D6Q8NGJ1 314 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 OR5L1Q8NGL2 311 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 OR1J1Q8NGS3 322 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 RNASE6Q93091 150 aaKnown RBP12.58□□□□□ -0.4
CXCL12-201ENST00000343575 CMBLQ96DG6 245 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 FGF23Q9GZV9 251 aaPredicted RBP12.58□□□□□ -0.4
CXCL12-201ENST00000343575 MYOZ1Q9NP98 299 aaPredicted RBP12.58□□□□□ -0.4
CXCL12-201ENST00000343575 GPR173Q9NS66 373 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 RASL12Q9NYN1 266 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 OR5V1Q9UGF6 321 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 GPR160Q9UJ42 338 aa12.58□□□□□ -0.4
CXCL12-201ENST00000343575 KMT2BQ9UMN6 2715 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-201ENST00000343575 ZNF816-ZNF321PA0A0X1KG74 233 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 DPRXA6NFQ7 191 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 H7C2Y5 167 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 PYCARD-AS1I3L0S3 204 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 LGALS8O00214 317 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 ZG16O60844 167 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 CDK2P24941 298 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 CD40P25942 277 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 NKX6-1P78426 367 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-201ENST00000343575 ZNF345Q14585 488 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 ZMYND11Q15326 602 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 GLT8D1Q68CQ7 371 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms