RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ARFRP1Q13795 201 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 PPA1Q15181 289 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 FAM169BQ8N8A8 192 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 ZSCAN4Q8NAM6 433 aaPredicted RBP15.71■□□□□ 0.11
USP39-201ENST00000323701 DEDD2Q8WXF8 326 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 MRGPRFQ96AM1 343 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 HIST1H2AAQ96QV6 131 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 GINS4Q9BRT9 223 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 OR51I2Q9H344 312 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 PRORYQ9H606 182 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 IFT46Q9NQC8 304 aa15.71■□□□□ 0.11
USP39-201ENST00000323701 NPDC1Q9NQX5 325 aaPredicted RBP15.71■□□□□ 0.11
USP39-201ENST00000323701 ACACBO00763 2458 aa15.71■□□□□ 0.1
USP39-201ENST00000323701 DHFRP00374 187 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 FAM189A2Q15884 450 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 PNLIPRP3Q17RR3 467 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 MRGPRGQ86SM5 289 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 TCTE3Q8IZS6 198 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 Q8NFD4 153 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 OCSTAMPQ9BR26 566 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 ST6GALNAC5Q9BVH7 336 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 CHST6Q9GZX3 395 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 MLNRO43193 412 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 PMP2P02689 132 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 GNG3P63215 75 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 MICBQ29980 383 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 IDO2Q6ZQW0 420 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 Q6ZR03 302 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 BPIFB2Q8N4F0 458 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 DMRTA2Q96SC8 542 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 JKAMPQ9P055 326 aa15.7■□□□□ 0.1
USP39-201ENST00000323701 ZNF107Q9UII5 783 aaPredicted RBP15.7■□□□□ 0.1
USP39-201ENST00000323701 ROS1P08922 2347 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 VSIG10L2P0DP72 767 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 NAT1P18440 290 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 DUSP1P28562 367 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 RAG2P55895 527 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 RRAS2P62070 204 aaPredicted RBP15.69■□□□□ 0.1
USP39-201ENST00000323701 HOXA4Q00056 320 aaPredicted RBP15.69■□□□□ 0.1
USP39-201ENST00000323701 RBMS2Q15434 407 aaKnown RBP15.69■□□□□ 0.1
USP39-201ENST00000323701 LRP11Q86VZ4 500 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 OR13C8Q8NGS7 320 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 EMG1Q92979 244 aaKnown RBP15.69■□□□□ 0.1
USP39-201ENST00000323701 SEC22CQ9BRL7 303 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 ADAT1Q9BUB4 502 aaKnown RBP15.69■□□□□ 0.1
USP39-201ENST00000323701 PIGMQ9H3S5 423 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 AK3Q9UIJ7 227 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 PURGQ9UJV8 347 aaKnown RBP15.69■□□□□ 0.1
USP39-201ENST00000323701 FAM221AA4D161 298 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 OR5B21A6NL26 309 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 SMLR1H3BR10 107 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 ATXN7O15265 892 aaPredicted RBP15.69■□□□□ 0.1
USP39-201ENST00000323701 Q6ZPA2 131 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 TMEM200AQ86VY9 491 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 MUCL1Q96DR8 90 aa15.69■□□□□ 0.1
USP39-201ENST00000323701 TRGV8A0A0C4DH27 118 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 SERPINE3A8MV23 424 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 FCN2Q15485 313 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 SCGB2B2Q4G0G5 96 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 RNASE10Q5GAN6 216 aaKnown RBP15.68■□□□□ 0.1
USP39-201ENST00000323701 FAM76BQ5HYJ3 339 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 ELP2Q6IA86 826 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 OR4K15Q8NH41 348 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 GTF3AQ92664 365 aaKnown RBP15.68■□□□□ 0.1
USP39-201ENST00000323701 MRPS24Q96EL2 167 aaKnown RBP15.68■□□□□ 0.1
USP39-201ENST00000323701 BCL2L14Q9BZR8 327 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 OR51J1Q9H342 316 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 MSL2Q9HCI7 577 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 AKR7A2O43488 359 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 OR7C1O76099 320 aaPredicted RBP15.68■□□□□ 0.1
USP39-201ENST00000323701 RBPJQ06330 500 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 ZNF154Q13106 437 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 SAXO1Q8IYX7 474 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 SCCPDHQ8NBX0 429 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 OR11H7Q8NGC8 314 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 OR52B4Q8NGK2 314 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 HSF4Q9ULV5 492 aa15.68■□□□□ 0.1
USP39-201ENST00000323701 CFAP46Q8IYW2 2715 aa15.67■□□□□ 0.1
USP39-201ENST00000323701 UBE2QL1A1L167 161 aa15.67■□□□□ 0.1
USP39-201ENST00000323701 TPD52L2O43399 206 aaKnown RBP15.67■□□□□ 0.1
USP39-201ENST00000323701 CXCL3P19876 107 aa15.67■□□□□ 0.1
USP39-201ENST00000323701 MPZP25189 248 aa15.67■□□□□ 0.1
USP39-201ENST00000323701 PCSK4Q6UW60 755 aa15.67■□□□□ 0.1
USP39-201ENST00000323701 C17orf107Q6ZR85 190 aa15.67■□□□□ 0.1
USP39-201ENST00000323701 ZNF573Q86YE8 665 aa15.67■□□□□ 0.1
USP39-201ENST00000323701 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
USP39-201ENST00000323701 OR8G5Q8NG78 346 aa15.67■□□□□ 0.1
USP39-201ENST00000323701 FN3KRPQ9HA64 309 aa15.67■□□□□ 0.1
USP39-201ENST00000323701 MEMO1Q9Y316 297 aa15.67■□□□□ 0.1
USP39-201ENST00000323701 OR2AT4A6NND4 320 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 ATP6V1G2-DDX39BF2Z307 99 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 TRAPPC2LH3BP13 241 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 RLN1P04808 185 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 KITLGP21583 273 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 FGF12P61328 243 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 SLC36A1Q7Z2H8 476 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 HOGA1Q86XE5 327 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 MKXQ8IYA7 352 aa15.66■□□□□ 0.1
USP39-201ENST00000323701 DACT3Q96B18 629 aaPredicted RBP15.66■□□□□ 0.1
USP39-201ENST00000323701 VKORC1Q9BQB6 163 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms