RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 SMIM4Q8WVI0 70 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 GCDHQ92947 438 aaPredicted RBP15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 YIPF5Q969M3 257 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 ERGIC1Q969X5 290 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 PHF21AQ96BD5 680 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 THAP7Q9BT49 309 aaPredicted RBP15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 EGLN1Q9GZT9 426 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 CLEC4MQ9H2X3 399 aaPredicted RBP15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 FN3KRPQ9HA64 309 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 GCM1Q9NP62 436 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 DECR2Q9NUI1 292 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 C1orf123Q9NWV4 160 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 A0A0A6YYD4 124 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 F8VVB4 439 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 F8VWA3 439 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 NOS1APO75052 506 aaPredicted RBP15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 PTHLHP12272 177 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 FAM189A2Q15884 450 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 DNM1P46Q6ZS02 220 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 Q8IYB0 196 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 OSR2Q8N2R0 312 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 CHPT1Q8WUD6 406 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 C15orf40Q8WUR7 153 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 ZNF488Q96MN9 340 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 NICN1Q9BSH3 213 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 URM1Q9BTM9 101 aaKnown RBP15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 TRAF4Q9BUZ4 470 aaPredicted RBP15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 SELENOIQ9C0D9 397 aa15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 RBFOX1Q9NWB1 397 aaKnown RBP15.98■□□□□ 0.15
PDLIM3-202ENST00000284770 PKDREJQ9NTG1 2253 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 TRAV18A0A075B6X5 111 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 TPD52L2O43399 206 aaKnown RBP15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 CFHR2P36980 270 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 ERVK11-1P61568 191 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 TRIQKQ629K1 86 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 RAB12Q6IQ22 244 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 MOGAT3Q86VF5 341 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 BATF2Q8N1L9 274 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 POC1AQ8NBT0 407 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 SETD6Q8TBK2 473 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 NRIP2Q9BQI9 281 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 NUDT16L1Q9BRJ7 211 aaKnown RBP15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 TM2D1Q9BX74 207 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 AUNIPQ9H7T9 357 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 SAP30LQ9HAJ7 183 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 LAMP3Q9UQV4 416 aa15.97■□□□□ 0.15
PDLIM3-202ENST00000284770 hCG_1807616A0A1W2PRN6 198 aa15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 GABARAPH6UMI1 98 aa15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 AKR7A2O43488 359 aa15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 PMELP40967 661 aa15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 FGF12P61328 243 aa15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 MRPS10P82664 201 aaKnown RBP15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 OXA1LQ15070 435 aa15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 FAM89BQ8N5H3 189 aa15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 POC5Q8NA72 575 aa15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 Q96M66 194 aa15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 VRK1Q99986 396 aaPredicted RBP15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 PLEKHF2Q9H8W4 249 aa15.96■□□□□ 0.15
PDLIM3-202ENST00000284770 PLA2G10O15496 165 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 SCGNO76038 276 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 CD3GP09693 182 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 VEGFCP49767 419 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 DEFA1P59665 94 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 DEFA3P59666 94 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 ASAH1Q13510 395 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 FAM58AQ8N1B3 248 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 OR51T1Q8NGJ9 327 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 OR10Z1Q8NGY1 313 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 OR52I2Q8NH67 350 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 Q8TCH9 128 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 PSMG3-AS1Q96PY0 264 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 PPP1R3CQ9UQK1 317 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 ST3GAL6Q9Y274 331 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 HRNRQ86YZ3 2850 aaPredicted RBP15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 TENM4Q6N022 2769 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 MEIOCA2RUB1 952 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 CHRM2P08172 466 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 CPT2P23786 658 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 RNASE12Q5GAN4 147 aaKnown RBP15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 NHLRC3Q5JS37 347 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 HACD4Q5VWC8 232 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 DCDC5Q6ZRR9 648 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 CENPSQ8N2Z9 138 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 C19orf18Q8NEA5 215 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 OR10R2Q8NGX6 335 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 POM121Q96HA1 1249 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 HES4Q9HCC6 221 aa15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 RBMX2Q9Y388 322 aaKnown RBP15.95■□□□□ 0.14
PDLIM3-202ENST00000284770 ARFGEF3Q5TH69 2177 aa15.94■□□□□ 0.14
PDLIM3-202ENST00000284770 FOXI3A8MTJ6 420 aaPredicted RBP15.94■□□□□ 0.14
PDLIM3-202ENST00000284770 COL8A1P27658 744 aa15.94■□□□□ 0.14
PDLIM3-202ENST00000284770 RBM11P57052 281 aaKnown RBP15.94■□□□□ 0.14
PDLIM3-202ENST00000284770 PIGYQ3MUY2 71 aa15.94■□□□□ 0.14
PDLIM3-202ENST00000284770 ZNF260Q3ZCT1 412 aa15.94■□□□□ 0.14
PDLIM3-202ENST00000284770 OR56B1Q8NGI3 324 aa15.94■□□□□ 0.14
PDLIM3-202ENST00000284770 LRRC29Q8WV35 223 aa15.94■□□□□ 0.14
PDLIM3-202ENST00000284770 FCAMRQ8WWV6 532 aa15.94■□□□□ 0.14
PDLIM3-202ENST00000284770 EMG1Q92979 244 aaKnown RBP15.94■□□□□ 0.14
PDLIM3-202ENST00000284770 CACNG6Q9BXT2 260 aa15.94■□□□□ 0.14
PDLIM3-202ENST00000284770 RAB1BQ9H0U4 201 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms