RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 GLS2Q9UI32 602 aa5.43□□□□□ -1.54
CD44-204ENST00000279452 GSTK1Q9Y2Q3 226 aa5.43□□□□□ -1.54
CD44-204ENST00000279452 INSIG2Q9Y5U4 225 aa5.43□□□□□ -1.54
CD44-204ENST00000279452 DYSFO75923 2080 aa5.43□□□□□ -1.54
CD44-204ENST00000279452 F8P00451 2351 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 RTTNQ86VV8 2226 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 PPIAL4CA0A0B4J2A2 164 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 TRBV5-5A0A0J9YX44 114 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 F8VVB4 439 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 F8VWA3 439 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 SIRPB1O00241 398 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 GABRPO00591 440 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 HSPB6O14558 160 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 SIGLEC5O15389 551 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 DENRO43583 198 aaKnown RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 TOX4O94842 621 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 HTR3BO95264 441 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 ECDO95905 644 aaPredicted RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 HAND1O96004 215 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 CSTBP04080 98 aaKnown RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 ACAA1P09110 424 aaPredicted RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 PPIAL4GP0DN37 164 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 ZNF44P15621 663 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 SERPINA2P20848 420 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 EPHA1P21709 976 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 MPZP25189 248 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 PSMB9P28065 219 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 DUSP1P28562 367 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 ZNF93P35789 620 aaPredicted RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 TGFBR2P37173 567 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 OR3A4PP47883 348 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 EDDM3BP56851 147 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 GABARAPL2P60520 117 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 FGF12P61328 243 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 ARF6P62330 175 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 RPS25P62851 125 aaKnown RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 MLLT11Q13015 90 aaPredicted RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 DOC2BQ14184 412 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 INSL4Q14641 139 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 TBCEQ15813 527 aaPredicted RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 DGUOKQ16854 277 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 ACSM3Q53FZ2 586 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 HSD17B12Q53GQ0 312 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 RNLSQ5VYX0 342 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 ZNF841Q6ZN19 808 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 ZNF788Q6ZQV5 615 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 GDPD3Q7L5L3 318 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 ZNF367Q7RTV3 350 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 RNF144BQ7Z419 303 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 C1QL2Q7Z5L3 287 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 CEACAM19Q7Z692 300 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 PDZD9Q8IXQ8 264 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 CMTM4Q8IZR5 234 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 FAM58AQ8N1B3 248 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 BPIFB2Q8N4F0 458 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 ZNF561Q8N587 486 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 CD177Q8N6Q3 437 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 ZNF485Q8NCK3 441 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 OR4M1Q8NGD0 313 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 OR10K1Q8NGX5 313 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 RPS4Y2Q8TD47 263 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 POM121Q96HA1 1249 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 DERL3Q96Q80 235 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 MGLLQ99685 303 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 MS4A7Q9GZW8 240 aaPredicted RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 CHST6Q9GZX3 395 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 DNTTIP1Q9H147 329 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 SLITRK2Q9H156 845 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 EXOSC4Q9NPD3 245 aaKnown RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 NOX4Q9NPH5 578 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 TMEM138Q9NPI0 162 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 ING3Q9NXR8 418 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 IL36RNQ9UBH0 155 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 KAAG1Q9UBP8 84 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 RPUSD1Q9UJJ7 312 aaKnown RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 ING4Q9UNL4 249 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 LSM2Q9Y333 95 aaKnown RBP5.42□□□□□ -1.54
CD44-204ENST00000279452 ITPR3Q14573 2671 aa5.42□□□□□ -1.54
CD44-204ENST00000279452 TRAV8-7A0A075B6U6 113 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 IGKV1-12A0A0C4DH73 117 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 KIR2DS1A0A191URI9 304 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 A0A1W2PPH5 198 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 MEX3AA1L020 520 aaKnown RBP5.41□□□□□ -1.54
CD44-204ENST00000279452 MAGEA13PA6NCF6 341 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 SH2D1BO14796 132 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 GPR37O15354 613 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 NOS1APO75052 506 aaPredicted RBP5.41□□□□□ -1.54
CD44-204ENST00000279452 KDM4BO94953 1096 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 CDRT1O95170 752 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 AVPP01185 164 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 IGKV1D-12P01611 117 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 LIPFP07098 398 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 SFTPBP07988 381 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 CHRM2P08172 466 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 FSTP19883 344 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 AMY2BP19961 511 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 ERVK11-1P61568 191 aa5.41□□□□□ -1.54
CD44-204ENST00000279452 RPS11P62280 158 aaKnown RBP eCLIP5.41□□□□□ -1.54
CD44-204ENST00000279452 PRB3Q04118 309 aaPredicted RBP5.41□□□□□ -1.54
CD44-204ENST00000279452 ACSM1Q08AH1 577 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms