RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 KIAA1671Q9BY89 1806 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 DYSFO75923 2080 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 CCDC187A0A096LP49 1063 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 A0A1W2PPE2 198 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 TSTD3H0UI37 97 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 GPR37O15354 613 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 HBG1P69891 147 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 HBG2P69892 147 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR2A2Q6IF42 318 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 LYZL2Q7Z4W2 148 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 PUSL1Q8N0Z8 303 aaKnown RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 THOC3Q96J01 351 aaKnown RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 SHARPINQ9H0F6 387 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 J3QRE1 110 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 PHOX2AO14813 284 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 FAM157BP0CG42 384 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 GLB1P16278 677 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 EFNB1P98172 346 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF260Q3ZCT1 412 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 IGSF11Q5DX21 431 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 ARV1Q9H2C2 271 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 SERTAD4Q9NUC0 356 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 ADAM11O75078 769 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 HOXD4P09016 255 aaPredicted RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 TMEM267Q0VDI3 215 aaPredicted RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 EDDM3AQ14507 147 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 SPATA46Q5T0L3 261 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR6X1Q8NH79 312 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR2V1Q8NHB1 315 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 TMEM37Q8WXS4 190 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF576Q9H609 170 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 CRLF2Q9HC73 371 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 TRAV14DV4A0A0A6YYC5 116 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 FIGNL2A6NMB9 653 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 C1QL1O75973 258 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 METTL15P1P0C7V9 234 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 LPAR6P43657 344 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 POLR2GP62487 172 aaKnown RBP eCLIP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 LFNGQ8NES3 379 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR1J1Q8NGS3 322 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 PP6455Q8WZ26 134 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 SAT2Q96F10 170 aaPredicted RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 PLEKHF2Q9H8W4 249 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 R4GN57 208 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 DXOO77932 396 aaKnown RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 TGFBR3Q03167 851 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF266Q14584 549 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR8G1Q15617 311 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 VHLLQ6RSH7 139 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 HOGA1Q86XE5 327 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 FAM24BQ8N5W8 94 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR13G1Q8NGZ3 307 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 NMES1Q9C002 83 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 PSENENQ9NZ42 101 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 TPPPO94811 219 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR2A4O95047 310 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 NHLH2Q02577 135 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR11L1Q8NGX0 322 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR6S1Q8NH40 331 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 INTS12Q96CB8 462 aaKnown RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR2A7Q96R45 310 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 PECRQ9BY49 303 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 LPAR5Q9H1C0 372 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 KIR2DS1A0A191URI9 304 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF32P17041 273 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 KIR2DS4P43632 304 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 KIR2DS1Q14954 304 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 USB1Q9BQ65 265 aaKnown RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF426Q9BUY5 554 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 CRISPLD2Q9H0B8 497 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 TOLLIPQ9H0E2 274 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 KIAA1549LQ6ZVL6 1849 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 TIMM8AO60220 97 aaPredicted RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 DFFBO76075 338 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 SPP1P10451 314 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 HOXA1P49639 335 aaPredicted RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 JMJD6Q6NYC1 403 aaPredicted RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.07□□□□□ -1.76
VPS13C-201ENST00000249837 OR10D4PQ8NGN7 298 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF519Q8TB69 540 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 PHYHIPLQ96FC7 376 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 ADAM19Q9H013 955 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 DUSP13Q9UII6 198 aa4.07□□□□□ -1.76
VPS13C-201ENST00000249837 A0A1W2PPV4 95 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 CYB5BO43169 146 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 RAB13P51153 203 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 BAXQ07812 192 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 C9orf152Q5JTZ5 239 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 WIPI1Q5MNZ9 446 aaPredicted RBP4.06□□□□□ -1.76
VPS13C-201ENST00000249837 PHF7Q9BWX1 381 aaPredicted RBP4.06□□□□□ -1.76
VPS13C-201ENST00000249837 FSCN3Q9NQT6 498 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 OBSL1O75147 1896 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 MALRD1Q5VYJ5 2156 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 CHST1O43916 411 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 TTRP02766 147 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 BMP5P22003 454 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 CYB561P49447 251 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 GSK3AP49840 483 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 RBFOX3A6NFN3 312 aa4.06□□□□□ -1.76
VPS13C-201ENST00000249837 E9PQ18 207 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms