RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CDK10Q15131 360 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 SRSF7Q16629 238 aaKnown RBP eCLIP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 FAM76BQ5HYJ3 339 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 CD276Q5ZPR3 534 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 OR2T2Q6IF00 324 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 RGS7BPQ6MZT1 257 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 MTFR2Q6P444 385 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 TMEM108Q6UXF1 575 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 SLC25A26Q70HW3 274 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 C1QL2Q7Z5L3 287 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 ZDHHC22Q8N966 263 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 KDF1Q8NAX2 398 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 OR8G5Q8NG78 346 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 OR13G1Q8NGZ3 307 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 KLF14Q8TD94 323 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 HPSE2Q8WWQ2 592 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 GTF3AQ92664 365 aaKnown RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 S100PBPQ96BU1 408 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 MARS2Q96GW9 593 aaKnown RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 ARHGAP5-AS1Q96IT6 56 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 CNTNAP3BQ96NU0 1288 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 DMRTA2Q96SC8 542 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 ADAT1Q9BUB4 502 aaKnown RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 TRAF4Q9BUZ4 470 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 PECRQ9BY49 303 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 CNTNAP3Q9BZ76 1288 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 OR2J1Q9GZK6 312 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 ALX4Q9H161 411 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 MYOZ1Q9NP98 299 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 NPDC1Q9NQX5 325 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 ING3Q9NXR8 418 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 MYEF2Q9P2K5 600 aaKnown RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 Q9UFV3 132 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 PURGQ9UJV8 347 aaKnown RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 ST3GAL6Q9Y274 331 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 HEATR1Q9H583 2144 aaKnown RBP8.33□□□□□ -1.08
PHGDH-215ENST00000641371 KMT2BQ9UMN6 2715 aaPredicted RBP8.33□□□□□ -1.08
PHGDH-215ENST00000641371 A0A0A6YYD4 124 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 A0A1B0GWJ7 208 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 C1QTNF9BB2RNN3 333 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 H7C1Q1 480 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 CCNKO75909 580 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 SNAPC5O75971 98 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 CD3DP04234 171 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 FCER2P06734 321 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 CELA3BP08861 270 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 C1QTNF9P0C862 333 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 FUT3P21217 361 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 ASCL1P50553 236 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 TMEM50BP56557 158 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 UBE2MP61081 183 aaKnown RBP8.33□□□□□ -1.08
PHGDH-215ENST00000641371 RRAS2P62070 204 aaPredicted RBP8.33□□□□□ -1.08
PHGDH-215ENST00000641371 GUCA2AQ02747 115 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 RBM39Q14498 530 aaKnown RBP8.33□□□□□ -1.08
PHGDH-215ENST00000641371 OR8G1Q15617 311 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 PLAC9Q5JTB6 97 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 HOGA1Q86XE5 327 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 BPIFB2Q8N4F0 458 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 ASB13Q8WXK3 278 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 GCDHQ92947 438 aaPredicted RBP8.33□□□□□ -1.08
PHGDH-215ENST00000641371 SNAPC3Q92966 411 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 NKX3-1Q99801 234 aaPredicted RBP8.33□□□□□ -1.08
PHGDH-215ENST00000641371 GINS4Q9BRT9 223 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 NICN1Q9BSH3 213 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 CXXC4Q9H2H0 198 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 OR51I2Q9H344 312 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 IFT22Q9H7X7 185 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 ETAA1Q9NY74 926 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 COQ3Q9NZJ6 369 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 GLS2Q9UI32 602 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 ZNF221Q9UK13 617 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 MGAT4AQ9UM21 535 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 MEMO1Q9Y316 297 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 ALG5Q9Y673 324 aa8.33□□□□□ -1.08
PHGDH-215ENST00000641371 UBE2QL1A1L167 161 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 M0R1B8 84 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 ZNHIT1O43257 154 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 SPRY1O43609 319 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-215ENST00000641371 ANGPTL7O43827 346 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 TIMM8AO60220 97 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-215ENST00000641371 CREBL2O60519 120 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-215ENST00000641371 NOS1APO75052 506 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-215ENST00000641371 AMY2AP04746 511 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 ZNF250P15622 560 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 AMY2BP19961 511 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 CA6P23280 308 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 GABRR1P24046 479 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 CHATP28329 748 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 MDH2P40926 338 aaKnown RBP8.32□□□□□ -1.08
PHGDH-215ENST00000641371 OR3A3P47888 321 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 CCR6P51684 374 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 TAS2R31P59538 309 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 PSG7Q13046 419 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 TSC22D1Q15714 1073 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 GRK1Q15835 563 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 FBXL19-AS1Q494R0 122 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 SFRP4Q6FHJ7 346 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-215ENST00000641371 FAHD2BQ6P2I3 314 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-215ENST00000641371 C11orf88Q6PI97 169 aa8.32□□□□□ -1.08
PHGDH-215ENST00000641371 Q6ZS49 121 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms