RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 CSPG4Q6UVK1 2322 aa6.81□□□□□ -1.32
TARDBP-224ENST00000621573 DCHS2Q6V1P9 2916 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 IGHV4-61A0A0C4DH41 118 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 A0A1B0GTI1 187 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 LOC107986453A0A1B0GWG9 222 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 hCG_1807616A0A1W2PRN6 198 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 LRRC30A6NM36 301 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 E9PI62 339 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 IFNL4K9M1U5 179 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 SLC1A7O00341 560 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 MYL12BO14950 172 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 CST4P01036 141 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 NRASP01111 189 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 CCDC159P0C7I6 412 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 UBCP0CG48 685 aaKnown RBP6.8□□□□□ -1.32
TARDBP-224ENST00000621573 LIMS3P0CW19 117 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 LIMS4P0CW20 117 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 ZNF12P17014 697 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 RBMXP38159 391 aaKnown RBP6.8□□□□□ -1.32
TARDBP-224ENST00000621573 CD200P41217 278 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 CCR9P51686 369 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 ELLP55199 621 aaPredicted RBP6.8□□□□□ -1.32
TARDBP-224ENST00000621573 NANOS3P60323 173 aaKnown RBP6.8□□□□□ -1.32
TARDBP-224ENST00000621573 LOXL1Q08397 574 aaPredicted RBP6.8□□□□□ -1.32
TARDBP-224ENST00000621573 MRPL28Q13084 256 aaKnown RBP6.8□□□□□ -1.32
TARDBP-224ENST00000621573 HNRNPA0Q13151 305 aaKnown RBP6.8□□□□□ -1.32
TARDBP-224ENST00000621573 MAB21L1Q13394 359 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 DMRTC1Q5HYR2 192 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 CEP78Q5JTW2 689 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 CLVS2Q5SYC1 327 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 PLCXD3Q63HM9 321 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 Q6ZWC4 215 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 ZDHHC23Q8IYP9 409 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 C1orf87Q8N0U7 546 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 PRSS35Q8N3Z0 413 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 CCDC54Q8NEL0 328 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 OR5AK2Q8NH90 309 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 ZNF420Q8TAQ5 688 aaPredicted RBP6.8□□□□□ -1.32
TARDBP-224ENST00000621573 HAVCR2Q8TDQ0 301 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 ITFG2Q969R8 447 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 ERGIC1Q969X5 290 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 RNF170Q96K19 258 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 ZNF184Q99676 751 aaPredicted RBP6.8□□□□□ -1.32
TARDBP-224ENST00000621573 ZNF649Q9BS31 505 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 RTL8AQ9BWD3 113 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 COMMD4Q9H0A8 199 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 PPP1R3EQ9H7J1 279 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 PLEKHA1Q9HB21 404 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 DCAF16Q9NXF7 216 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 CLEC2DQ9UHP7 191 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 ERGIC3Q9Y282 383 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 WIPI2Q9Y4P8 454 aa6.8□□□□□ -1.32
TARDBP-224ENST00000621573 PDZD2O15018 2839 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 TRBV2A0A0J9YWF9 115 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 A0A1B0GWJ7 208 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 LRP5LA4QPB2 252 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 A6NIN4 97 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 TMEM212A6NML5 194 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 TMEM178BH3BS89 294 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 CYB5R3P00387 301 aaPredicted RBP6.79□□□□□ -1.32
TARDBP-224ENST00000621573 SERPINA3P01011 423 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 IGLV3-1P01715 115 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 HEXAP06865 529 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 CCL1P22362 96 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 C21orf33P30042 268 aaPredicted RBP6.79□□□□□ -1.32
TARDBP-224ENST00000621573 PMELP40967 661 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 TGM4P49221 684 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 GPM6AP51674 278 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 GTF2A1P52655 376 aaPredicted RBP6.79□□□□□ -1.32
TARDBP-224ENST00000621573 CDH15P55291 814 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 MPPED2Q15777 294 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 OR1M1Q8NGA1 313 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 OR52N1Q8NH53 320 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 OR5P3Q8WZ94 311 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 GAL3ST1Q99999 423 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 DPCDQ9BVM2 203 aaPredicted RBP6.79□□□□□ -1.32
TARDBP-224ENST00000621573 CCDC90BQ9GZT6 254 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 GPR173Q9NS66 373 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 FKBP14Q9NWM8 211 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 C1orf123Q9NWV4 160 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 BABAM2Q9NXR7 383 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 UBAP1Q9NZ09 502 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 ERVK-18Q9QC07 812 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 RNF7Q9UBF6 113 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 HHLA2Q9UM44 414 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 NPTNQ9Y639 398 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 V9GYS6 101 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 HRNRQ86YZ3 2850 aaPredicted RBP6.79□□□□□ -1.32
TARDBP-224ENST00000621573 ACANP16112 2415 aa6.79□□□□□ -1.32
TARDBP-224ENST00000621573 A0A096LNT2 108 aa6.78□□□□□ -1.32
TARDBP-224ENST00000621573 ANKRD61A6NGH8 418 aa6.78□□□□□ -1.32
TARDBP-224ENST00000621573 TMEM210A6NLX4 147 aa6.78□□□□□ -1.32
TARDBP-224ENST00000621573 OR4C45A6NMZ5 311 aa6.78□□□□□ -1.32
TARDBP-224ENST00000621573 DHRS7CA6NNS2 312 aa6.78□□□□□ -1.32
TARDBP-224ENST00000621573 ZNF732B4DXR9 585 aa6.78□□□□□ -1.32
TARDBP-224ENST00000621573 WNT9BO14905 357 aa6.78□□□□□ -1.32
TARDBP-224ENST00000621573 LMX1BO60663 402 aa6.78□□□□□ -1.32
TARDBP-224ENST00000621573 CDK1P06493 297 aa6.78□□□□□ -1.32
TARDBP-224ENST00000621573 HNRNPCP07910 306 aaKnown RBP eCLIP6.78□□□□□ -1.32
TARDBP-224ENST00000621573 RPSAP08865 295 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms