RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 KLK11Q9UBX7 282 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 RIMS3Q9UJD0 308 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 POFUT2Q9Y2G5 429 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 SH3GLB1Q9Y371 365 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 MED31Q9Y3C7 131 aa2.86□□□□□ -1.95
CKS1BP3-201ENST00000600888 AGRNO00468 2067 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 LOC390937A0A1W2PQ73 354 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 A0A1W2PRG6 482 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 C11orf98E9PRG8 122 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 CXCR6O00574 342 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 NME4O00746 187 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 FFAR1O14842 300 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 MLNRO43193 412 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 RNF13O43567 381 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR7A10O76100 309 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 FARS2O95363 451 aaKnown RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 PTHP01270 115 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGHG1P01857 330 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGHMP01871 453 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 IFNW1P05000 195 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGFBP1P08833 259 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 MMP7P09237 267 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR4A8P0C604 315 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 NPR2P20594 1047 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR3A1P47881 315 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR1E2P47887 323 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 CSNK1A1P48729 337 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 GSK3BP49841 420 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 DAP3P51398 398 aaKnown RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 IDH3GP51553 393 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC7A2P52569 658 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 BIDP55957 195 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 TAS2R41P59536 307 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 RPS23P62266 143 aaKnown RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 LIPEQ05469 1076 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 PRKCDQ05655 676 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 RPL18Q07020 188 aaKnown RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 KIAA0141Q14154 515 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 TRAM2Q15035 370 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 TMEM249Q2WGJ8 235 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 IQCCQ4KMZ1 466 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 LRRC23Q53EV4 343 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 IFI44LQ53G44 452 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 THEM4Q5T1C6 240 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 SHQ1Q6PI26 577 aaKnown RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 UGT2A3Q6UWM9 527 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 PET117Q6UWS5 81 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 Q6ZVQ6 151 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 NANOGNBQ7Z5D8 188 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 MDP1Q86V88 176 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 HIPK1Q86Z02 1210 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF584Q8IVC4 421 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 NKAIN4Q8IVV8 208 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 SKA3Q8IX90 412 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 PHC2Q8IXK0 858 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC22A24Q8N4F4 322 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 C10orf53Q8N6V4 93 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 LRRC17Q8N6Y2 441 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF525Q8N782 197 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 LRRC75AQ8NAA5 344 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 NOXO1Q8NFA2 376 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 GEMIN6Q8WXD5 167 aaKnown RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 ACOT11Q8WXI4 607 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 MCHR2Q969V1 340 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 FAM162AQ96A26 154 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 MRPL24Q96A35 216 aaKnown RBP2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 RCN3Q96D15 328 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 BPIFA2Q96DR5 249 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 SGTBQ96EQ0 304 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 ALG12Q9BV10 488 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 RAB1BQ9H0U4 201 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 TXNIPQ9H3M7 391 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 HEXA-AS1Q9H8Q6 139 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 GORASP2Q9H8Y8 452 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 SIAEQ9HAT2 523 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 NOX3Q9HBY0 568 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 INIPQ9NRY2 104 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 CMTM6Q9NX76 183 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 ARMCX1Q9P291 453 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC7A8Q9UHI5 535 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 FKBP7Q9Y680 259 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 STAB1Q9NY15 2570 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 DNHD1Q96M86 4753 aa2.85□□□□□ -1.95
CKS1BP3-201ENST00000600888 ARHGAP32A7KAX9 2087 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGLV3-9A0A075B6K5 115 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 A0A087WUU8 490 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 A0A1W2PRQ8 180 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 A6NIZ1 184 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 ACOD1A6NK06 481 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 H3BSA7 217 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 hCG_2039718K7EN88 272 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 M0R233 179 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 KPNA4O00629 521 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 SIGLEC5O15389 551 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 TNFSF12O43508 249 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 STAMBPO95630 424 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 RAB36O95755 333 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 HLA-HP01893 362 aa2.84□□□□□ -1.95
CKS1BP3-201ENST00000600888 SEMG1P04279 462 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms