RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 TRAV40A0A0B4J280 105 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 IGKV1-9A0A0C4DH69 117 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 E9PI62 339 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 TRIM77I1YAP6 450 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 ZFPL1O95159 310 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 MT-ND2P03891 347 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 CCDC159P0C7I6 412 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 SELLP14151 372 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 PRDX2P32119 198 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 GABRA2P47869 451 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 RBP2P50120 134 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 ATP1B3P54709 279 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 ARF6P62330 175 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 SLC34A1Q06495 639 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 PDCD1Q15116 288 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 CCDC58Q4VC31 144 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 GPR157Q5UAW9 335 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 RBMS3Q6XE24 437 aaKnown RBP11.52□□□□□ -0.57
GGA3-215ENST00000582821 C1orf122Q6ZSJ8 110 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 ZNF561Q8N587 486 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 CD177Q8N6Q3 437 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 KIR3DL3Q8N743 410 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 ZDHHC22Q8N966 263 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 ZNRF1Q8ND25 227 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 OR51A4Q8NGJ6 313 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 OR10AC1Q8NH08 325 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 OR5AK2Q8NH90 309 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 TRMT10AQ8TBZ6 339 aaKnown RBP11.52□□□□□ -0.57
GGA3-215ENST00000582821 RPS4Y2Q8TD47 263 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 FAM216AQ8WUB2 273 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 SPSB1Q96BD6 273 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 ZNF488Q96MN9 340 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 PCGF1Q9BSM1 259 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 VCXQ9H320 206 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 MTCH1Q9NZJ7 389 aa11.52□□□□□ -0.57
GGA3-215ENST00000582821 NKX1-2Q9UD57 310 aaPredicted RBP11.52□□□□□ -0.57
GGA3-215ENST00000582821 EXOSC1Q9Y3B2 195 aaKnown RBP11.52□□□□□ -0.57
GGA3-215ENST00000582821 CENPVL3A0A0U1RRI6 287 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 H0YJX3 145 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 NXPH2O95156 264 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 KNG1P01042 644 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 TFF1P04155 84 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 SFTPBP07988 381 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 GNAO1P09471 354 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 PIPP12273 146 aaPredicted RBP11.51□□□□□ -0.57
GGA3-215ENST00000582821 ZNF20P17024 532 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 ETV1P50549 477 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 RPL22L1Q6P5R6 122 aaKnown RBP11.51□□□□□ -0.57
GGA3-215ENST00000582821 METAP1DQ6UB28 335 aaPredicted RBP11.51□□□□□ -0.57
GGA3-215ENST00000582821 TMPRSS11AQ6ZMR5 421 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 MKXQ8IYA7 352 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 C8orf59Q8N0T1 100 aaPredicted RBP11.51□□□□□ -0.57
GGA3-215ENST00000582821 PARP16Q8N5Y8 322 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 SIGLECL1Q8N7X8 197 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 OR13C3Q8NGS6 347 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 NPRL2Q8WTW4 380 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 TFAP2CQ92754 450 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 GGHQ92820 318 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 TMEM80Q96HE8 168 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 CEP19Q96LK0 163 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 ZNF48Q96MX3 618 aaPredicted RBP11.51□□□□□ -0.57
GGA3-215ENST00000582821 PDCD1LG2Q9BQ51 273 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 COMMD4Q9H0A8 199 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 ESM1Q9NQ30 184 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 PLCXD1Q9NUJ7 323 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 DSCAML1Q8TD84 2053 aa11.51□□□□□ -0.57
GGA3-215ENST00000582821 IGHV3OR16-10A0A075B7F0 116 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 TRBV23-1A0A0A0MS06 115 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 TRBV2A0A0J9YWF9 115 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 OGG1O15527 345 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 RGS9O75916 674 aaPredicted RBP11.5□□□□□ -0.57
GGA3-215ENST00000582821 NDUFB7P17568 137 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 AZGP1P25311 298 aaKnown RBP11.5□□□□□ -0.57
GGA3-215ENST00000582821 GTF2A1P52655 376 aaPredicted RBP11.5□□□□□ -0.57
GGA3-215ENST00000582821 MTCP1P56278 107 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 LAIR2Q6ISS4 152 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 LHFPL2Q6ZUX7 228 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 SLC25A26Q70HW3 274 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 SERPINA12Q8IW75 414 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 Q8IYB0 196 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 CMTM4Q8IZR5 234 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.5□□□□□ -0.57
GGA3-215ENST00000582821 OR5D14Q8NGL3 314 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 FAM234AQ9H0X4 552 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 ZCCHC4Q9H5U6 513 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 UNKLQ9H9P5 680 aaKnown RBP11.5□□□□□ -0.57
GGA3-215ENST00000582821 ZMAT3Q9HA38 289 aaKnown RBP11.5□□□□□ -0.57
GGA3-215ENST00000582821 BABAM2Q9NXR7 383 aa11.5□□□□□ -0.57
GGA3-215ENST00000582821 CNOT2Q9NZN8 540 aaKnown RBP11.5□□□□□ -0.57
GGA3-215ENST00000582821 EFCAB10A6NFE3 127 aa11.49□□□□□ -0.57
GGA3-215ENST00000582821 F8VVB4 439 aa11.49□□□□□ -0.57
GGA3-215ENST00000582821 F8VWA3 439 aa11.49□□□□□ -0.57
GGA3-215ENST00000582821 CLDN34H7C241 214 aa11.49□□□□□ -0.57
GGA3-215ENST00000582821 M0R1W7 72 aa11.49□□□□□ -0.57
GGA3-215ENST00000582821 SLC1A7O00341 560 aa11.49□□□□□ -0.57
GGA3-215ENST00000582821 MYL12AP19105 171 aa11.49□□□□□ -0.57
GGA3-215ENST00000582821 PRTN3P24158 256 aa11.49□□□□□ -0.57
GGA3-215ENST00000582821 UBA52P62987 128 aaKnown RBP11.49□□□□□ -0.57
GGA3-215ENST00000582821 ST3GAL4Q11206 333 aa11.49□□□□□ -0.57
GGA3-215ENST00000582821 PDZK1IP1Q13113 114 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms