RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 WIPI2Q9Y4P8 454 aa8.3□□□□□ -1.08
GGA3-209ENST00000580646 CACNG2Q9Y698 323 aa8.3□□□□□ -1.08
GGA3-209ENST00000580646 A6NLC8 198 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 SRRM5B3KS81 715 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 B4DSR2 109 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 J3QT63 122 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 SULT1B1O43704 296 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 NOS1APO75052 506 aaPredicted RBP8.29□□□□□ -1.08
GGA3-209ENST00000580646 SC5DO75845 299 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 ALDOBP05062 364 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 GRPP07492 148 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 SRD5A1P18405 259 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 FSTP19883 344 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 AZGP1P25311 298 aaKnown RBP8.29□□□□□ -1.08
GGA3-209ENST00000580646 MDH2P40926 338 aaKnown RBP8.29□□□□□ -1.08
GGA3-209ENST00000580646 RBP2P50120 134 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 GPM6AP51674 278 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 TEX36Q5VZQ5 186 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 LHFPL2Q6ZUX7 228 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 GPR141Q7Z602 305 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 LRRC28Q86X40 367 aaPredicted RBP8.29□□□□□ -1.08
GGA3-209ENST00000580646 SPICQ8N5J4 248 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 GCSAMQ8N6F7 178 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 ZFP41Q8N8Y5 198 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 SCCPDHQ8NBX0 429 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 ZNF671Q8TAW3 534 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 PHYHIPQ92561 330 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 C12orf43Q96C57 262 aaKnown RBP8.29□□□□□ -1.08
GGA3-209ENST00000580646 BORCS8Q96FH0 119 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 OPALINQ96PE5 141 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 C1orf123Q9NWV4 160 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 TREM2Q9NZC2 230 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 FOXJ3Q9UPW0 622 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 POLDIP2Q9Y2S7 368 aa8.29□□□□□ -1.08
GGA3-209ENST00000580646 PPIAL4EA0A075B759 164 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 TRBV5-7A0A0A0MS05 114 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 IGKV1-9A0A0C4DH69 117 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 A6NIN4 97 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 RNF212BA8MTL3 300 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 ZNF879B4DU55 563 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 FAM157AC9JC47 383 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 PPIAL4DF5H284 164 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 H3BSH0 61 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 CDIPTO14735 213 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 NDUFA2O43678 99 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 CYB5R3P00387 301 aaPredicted RBP8.28□□□□□ -1.08
GGA3-209ENST00000580646 PPIAL4FP0DN26 164 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 MUC1P15941 1255 aaPredicted RBP8.28□□□□□ -1.08
GGA3-209ENST00000580646 IGFBP3P17936 291 aaPredicted RBP8.28□□□□□ -1.08
GGA3-209ENST00000580646 RAB3AP20336 220 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 GALP22466 123 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 GABRA5P31644 462 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 MAP2K4P45985 399 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 HAAOP46952 286 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 ATP1B3P54709 279 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 DVL1P1P54792 670 aaPredicted RBP8.28□□□□□ -1.08
GGA3-209ENST00000580646 B2MP61769 119 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 LMO4P61968 165 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 TAGLNQ01995 201 aaKnown RBP8.28□□□□□ -1.08
GGA3-209ENST00000580646 IL24Q13007 206 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 ZNF404Q494X3 552 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 AVPI1Q5T686 147 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 LIPKQ5VXJ0 399 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 FAM122CQ6P4D5 195 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 UNQ9370/PRO34162Q6UXP9 181 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 IDO2Q6ZQW0 420 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 KCTD8Q6ZWB6 473 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 CDH26Q8IXH8 852 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 PHC2Q8IXK0 858 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 SPATA3Q8NHX4 192 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 AQP3Q92482 292 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 DERL3Q96Q80 235 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 WDR12Q9GZL7 423 aaKnown RBP8.28□□□□□ -1.08
GGA3-209ENST00000580646 RHOFQ9HBH0 211 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 UFSP2Q9NUQ7 469 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 RASL12Q9NYN1 266 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 SF3B6Q9Y3B4 125 aaKnown RBP8.28□□□□□ -1.08
GGA3-209ENST00000580646 PPIAL4AQ9Y536 164 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 SVEP1Q4LDE5 3571 aa8.28□□□□□ -1.08
GGA3-209ENST00000580646 IGKV1-27A0A075B6S5 117 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 A0A087WXM4 84 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 TRAV38-1A0A0B4J264 116 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 PNMA8CA0A1B0GUJ8 204 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 hCG_1807616A0A1W2PRN6 198 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 OOEPA6NGQ2 149 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 LGALS8O00214 317 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 CCRL2O00421 344 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 PHF1O43189 567 aaPredicted RBP8.27□□□□□ -1.09
GGA3-209ENST00000580646 HSMCR30P0CW71 290 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 PGA5P0DJD9 388 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 SOX2P48431 317 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 MTCP1P56278 107 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 ZNF846Q147U1 533 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 ZMYND11Q15326 602 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 ARMCX4Q5H9R4 360 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 SYT6Q5T7P8 510 aaPredicted RBP8.27□□□□□ -1.09
GGA3-209ENST00000580646 ASPHD2Q6ICH7 369 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 HAGHLQ6PII5 290 aaPredicted RBP8.27□□□□□ -1.09
GGA3-209ENST00000580646 ZNF826PQ6ZT77 177 aa8.27□□□□□ -1.09
GGA3-209ENST00000580646 GLCCI1Q86VQ1 547 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms