RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 H0YHG0 523 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 TCF21O43680 179 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 PRKACBP22694 351 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 RBP2P50120 134 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 GTF2A1P52655 376 aaPredicted RBP11.96□□□□□ -0.49
MKS1-207ENST00000578789 CAV3P56539 151 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 IKZF1Q13422 519 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 DGUOKQ16854 277 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 LRRC10Q5BKY1 277 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 LHFPL2Q6ZUX7 228 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 PARP16Q8N5Y8 322 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 PNLDC1Q8NA58 520 aaKnown RBP11.96□□□□□ -0.49
MKS1-207ENST00000578789 LY6G5BQ8NDX9 201 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 C8orf46Q8TAG6 207 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 RGP1Q92546 391 aaPredicted RBP11.96□□□□□ -0.49
MKS1-207ENST00000578789 OPALINQ96PE5 141 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 VCX3BQ9H321 246 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 BABAM2Q9NXR7 383 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 CLEC2DQ9UHP7 191 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 NUP50Q9UKX7 468 aa11.96□□□□□ -0.49
MKS1-207ENST00000578789 OGG1O15527 345 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 ALX3O95076 343 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 NXPH2O95156 264 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 LALBAP00709 142 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 PLATP00750 562 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 TFF1P04155 84 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 MMP9P14780 707 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 GABRA2P47869 451 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 ATP1B3P54709 279 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 FGF12P61328 243 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 RIPK1Q13546 671 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 USP43Q70EL4 1123 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 AHSA2Q719I0 299 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 BPIFB6Q8NFQ5 453 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 SMIM19Q96E16 107 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 CEP19Q96LK0 163 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 MDFIQ99750 246 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 DCTN5Q9BTE1 182 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 SIRPDQ9H106 197 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 ZCCHC4Q9H5U6 513 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 CHCHD3Q9NX63 227 aaKnown RBP11.95□□□□□ -0.5
MKS1-207ENST00000578789 MTCH1Q9NZJ7 389 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 SLC25A10Q9UBX3 287 aaPredicted RBP11.95□□□□□ -0.5
MKS1-207ENST00000578789 DHDHQ9UQ10 334 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 MAB21L2Q9Y586 359 aa11.95□□□□□ -0.5
MKS1-207ENST00000578789 SIRT4Q9Y6E7 314 aaPredicted RBP11.95□□□□□ -0.5
MKS1-207ENST00000578789 FBN1P35555 2871 aaKnown RBP11.95□□□□□ -0.5
MKS1-207ENST00000578789 TRAV40A0A0B4J280 105 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 RFPL4AA6NLU0 287 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 RFPL4AL1F8VTS6 287 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 SLC1A7O00341 560 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 KNG1P01042 644 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 IGHV4-38-2P0DP08 117 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 C6orf141Q5SZD1 244 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 RNLSQ5VYX0 342 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 DMKNQ6E0U4 476 aaPredicted RBP11.94□□□□□ -0.5
MKS1-207ENST00000578789 ZNF529Q6P280 563 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 C9orf139Q6ZV77 190 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 SLC25A26Q70HW3 274 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 STX19Q8N4C7 294 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 CD177Q8N6Q3 437 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 KIR3DL3Q8N743 410 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 OR13C9Q8NGT0 318 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 GPR148Q8TDV2 347 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 ZNF418Q8TF45 676 aaPredicted RBP11.94□□□□□ -0.5
MKS1-207ENST00000578789 TSEN15Q8WW01 171 aaKnown RBP11.94□□□□□ -0.5
MKS1-207ENST00000578789 TMEM158Q8WZ71 300 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 SLAMF9Q96A28 289 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 SLC6A7Q99884 636 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 SUCNR1Q9BXA5 334 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 ANKRD60Q9BZ19 345 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 ZNF69Q9UC07 566 aa11.94□□□□□ -0.5
MKS1-207ENST00000578789 SULT1B1O43704 296 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 MYF6P23409 242 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 FPR2P25090 351 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 C21orf33P30042 268 aaPredicted RBP11.93□□□□□ -0.5
MKS1-207ENST00000578789 PRDX2P32119 198 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 HSPA13P48723 471 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 POU3F4P49335 361 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 MTCP1P56278 107 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 HILS1P60008 231 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 KRTAP24-1Q3LI83 254 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 METTL11BQ5VVY1 283 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 ASPHD2Q6ICH7 369 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 CRIP3Q6Q6R5 217 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 SERPINA12Q8IW75 414 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 MKXQ8IYA7 352 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 Q8IYB0 196 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 BATF2Q8N1L9 274 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 BPIFB2Q8N4F0 458 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 ZNF561Q8N587 486 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 ZNRF1Q8ND25 227 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 OR5D14Q8NGL3 314 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 GATAD2BQ8WXI9 593 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 PGLYRP3Q96LB9 341 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 WDFY2Q96P53 400 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 TBX15Q96SF7 602 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 CNTD2Q9H8S5 307 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 NEK6Q9HC98 313 aa11.93□□□□□ -0.5
MKS1-207ENST00000578789 KPTNQ9Y664 436 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms