RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TMEM156Q8N614 296 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 RNF138Q8WVD3 245 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 ZNF385AQ96PM9 386 aaKnown RBP15.24■□□□□ 0.03
SCARF1-205ENST00000571272 AK3Q9UIJ7 227 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 KCNIP3Q9Y2W7 256 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 V9GYS6 101 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 FAM230AA0A1W2PPH8 454 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 MT-ND4LP03901 98 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 S100A9P06702 114 aaKnown RBP15.24■□□□□ 0.03
SCARF1-205ENST00000571272 FABP9Q0Z7S8 132 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 SNAI3Q3KNW1 292 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 ABCA11PQ4W5N1 156 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 CARFQ8N187 725 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 RTN4IP1Q8WWV3 396 aaPredicted RBP15.24■□□□□ 0.03
SCARF1-205ENST00000571272 PP6455Q8WZ26 134 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 Q96M66 194 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 OR6C1Q96RD1 312 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 PLEKHA2Q9HB19 425 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 PLEK2Q9NYT0 353 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 FBXO7Q9Y3I1 522 aa15.24■□□□□ 0.03
SCARF1-205ENST00000571272 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 E5RGE8 158 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 M0R135 149 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 ZFAND5O76080 213 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 DANCRP0C864 163 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 PNLIPP16233 465 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 ACKR3P25106 362 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 NHLH2Q02577 135 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 FAM24BQ8N5W8 94 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 CD300LFQ8TDQ1 290 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 SLC25A43Q8WUT9 341 aaPredicted RBP15.23■□□□□ 0.03
SCARF1-205ENST00000571272 ZNF799Q96GE5 643 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 NSG2Q9Y328 171 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 A0A0U1RQV5 110 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.23■□□□□ 0.03
SCARF1-205ENST00000571272 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.23■□□□□ 0.03
SCARF1-205ENST00000571272 ZNF728P0DKX0 622 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 CTSSP25774 331 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 ARL6IP1Q15041 203 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 ADAM5Q6NVV9 412 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 ZNF561Q8N587 486 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 OR52M1Q8NGK5 317 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 OR5L1Q8NGL2 311 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 MARS2Q96GW9 593 aaKnown RBP15.23■□□□□ 0.03
SCARF1-205ENST00000571272 SCRT1Q9BWW7 348 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 NELFAQ9H3P2 528 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 NIT2Q9NQR4 276 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 B3GALT1Q9Y5Z6 326 aa15.23■□□□□ 0.03
SCARF1-205ENST00000571272 IGLV3-12A0A075B6K2 115 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 RRP8O43159 456 aaKnown RBP15.22■□□□□ 0.03
SCARF1-205ENST00000571272 ECI1P42126 302 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 OR2B8PP59922 312 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 LSM6P62312 80 aaKnown RBP15.22■□□□□ 0.03
SCARF1-205ENST00000571272 RSU1Q15404 277 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 PLXDC2Q6UX71 529 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 CPEB2Q7Z5Q1 589 aaKnown RBP15.22■□□□□ 0.03
SCARF1-205ENST00000571272 ZNF837Q96EG3 531 aaPredicted RBP15.22■□□□□ 0.03
SCARF1-205ENST00000571272 LUZP4Q9P127 313 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 SEMA5BQ9P283 1151 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 UMAD1C9J7I0 102 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 FABP1P07148 127 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 PAX6P26367 422 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 TMEM187Q14656 261 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 HMGN3Q15651 99 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 UCN2Q96RP3 112 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 RASL10BQ96S79 203 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 NAA60Q9H7X0 242 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 IGLV3-32A0A0A0MS00 114 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 BORCS7-ASMTA0A0B4J1R7 106 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 UBE2CO00762 179 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 SCRG1O75711 98 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 OR13C7P0DN81 318 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 AGAP20933 346 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 SLC35A1P78382 337 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 PDCD1Q15116 288 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 ZNF574Q6ZN55 896 aaPredicted RBP15.22■□□□□ 0.03
SCARF1-205ENST00000571272 OR11L1Q8NGX0 322 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 SGK3Q96BR1 496 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 C19orf12Q9NSK7 152 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 HDGFL3Q9Y3E1 203 aa15.22■□□□□ 0.03
SCARF1-205ENST00000571272 A0A1W2PPE2 198 aa15.21■□□□□ 0.03
SCARF1-205ENST00000571272 SEC11BP0C7V7 166 aa15.21■□□□□ 0.03
SCARF1-205ENST00000571272 NOVA1P51513 510 aaKnown RBP15.21■□□□□ 0.03
SCARF1-205ENST00000571272 ZNF133P52736 654 aaPredicted RBP15.21■□□□□ 0.03
SCARF1-205ENST00000571272 RTL6Q6ICC9 239 aa15.21■□□□□ 0.03
SCARF1-205ENST00000571272 SPACA9Q96E40 222 aaPredicted RBP15.21■□□□□ 0.03
SCARF1-205ENST00000571272 DEFB126Q9BYW3 111 aa15.21■□□□□ 0.03
SCARF1-205ENST00000571272 AKIRIN1Q9H9L7 192 aaPredicted RBP15.21■□□□□ 0.03
SCARF1-205ENST00000571272 NECAP2Q9NVZ3 263 aa15.21■□□□□ 0.03
SCARF1-205ENST00000571272 ZDHHC8Q9ULC8 765 aa15.21■□□□□ 0.03
SCARF1-205ENST00000571272 CA14Q9ULX7 337 aa15.21■□□□□ 0.03
SCARF1-205ENST00000571272 RFNGQ9Y644 331 aa15.21■□□□□ 0.03
SCARF1-205ENST00000571272 NQO2P16083 231 aa15.21■□□□□ 0.02
SCARF1-205ENST00000571272 GLP1RP43220 463 aa15.21■□□□□ 0.02
SCARF1-205ENST00000571272 RNF212Q495C1 297 aa15.21■□□□□ 0.02
SCARF1-205ENST00000571272 FBXW12Q6X9E4 464 aa15.21■□□□□ 0.02
SCARF1-205ENST00000571272 SLC22A8Q8TCC7 542 aa15.21■□□□□ 0.02
SCARF1-205ENST00000571272 NABP1Q96AH0 204 aa15.21■□□□□ 0.02
SCARF1-205ENST00000571272 ARV1Q9H2C2 271 aa15.21■□□□□ 0.02
SCARF1-205ENST00000571272 DECR2Q9NUI1 292 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms