RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 A6NLC8 198 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 TCF21O43680 179 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 CDRT1O95170 752 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 ZNF20P17024 532 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 IGFBP3P17936 291 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-225ENST00000569245 ACKR3P25106 362 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 SDC2P34741 201 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 GNALP38405 381 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 SEC61A1P61619 476 aaKnown RBP12.12□□□□□ -0.47
COMMD4-225ENST00000569245 CNPY1Q3B7I2 92 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 ASPHD2Q6ICH7 369 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 ZNF529Q6P280 563 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 DEFB108BQ8NET1 73 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 CSNK2A3Q8NEV1 391 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 Q8TCH9 128 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 PP6455Q8WZ26 134 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 SLITRK2Q9H156 845 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 PLEKHA1Q9HB21 404 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 C1orf123Q9NWV4 160 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 RNF7Q9UBF6 113 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 CKLFQ9UBR5 152 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 MIOXQ9UGB7 285 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 OR5V1Q9UGF6 321 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 PIGLQ9Y2B2 252 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 DYSFO75923 2080 aa12.12□□□□□ -0.47
COMMD4-225ENST00000569245 hCG_1807616A0A1W2PRN6 198 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 ALX3O95076 343 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 AVPP01185 164 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 WNT2P09544 360 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 ADRA2CP18825 462 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 RPS19P39019 145 aaKnown RBP12.11□□□□□ -0.47
COMMD4-225ENST00000569245 UTS2BQ765I0 119 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 NLRC3Q7RTR2 1065 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 FTMTQ8N4E7 242 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 C19orf18Q8NEA5 215 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 OR5D14Q8NGL3 314 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 NANPQ8TBE9 248 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 DYNC2LI1Q8TCX1 351 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 ORAI1Q96D31 301 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 TMEM246Q9BRR3 403 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 PAPOLGQ9BWT3 736 aaKnown RBP12.11□□□□□ -0.47
COMMD4-225ENST00000569245 SSBP3Q9BWW4 388 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-225ENST00000569245 TMPRSS13Q9BYE2 586 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 CHST5Q9GZS9 411 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 ZCCHC4Q9H5U6 513 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 TCF7L1Q9HCS4 588 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 MMP26Q9NRE1 261 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 TAS2R4Q9NYW5 299 aa12.11□□□□□ -0.47
COMMD4-225ENST00000569245 TRAV8-7A0A075B6U6 113 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 ZNF816-ZNF321PA0A0X1KG74 233 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 F5H0A9 414 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-225ENST00000569245 PDCD5O14737 125 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 FAHP16930 419 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 GNB2P62879 340 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 ZNF404Q494X3 552 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 CEP78Q5JTW2 689 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 TMEM42Q69YG0 159 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 SFRP4Q6FHJ7 346 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-225ENST00000569245 C1orf229Q6ZS94 237 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-225ENST00000569245 LRRTM1Q86UE6 522 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 OR8B3Q8NGG8 313 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 SPATA3Q8NHX4 192 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 NEIL1Q96FI4 390 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-225ENST00000569245 OR8B2Q96RD0 313 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 RHBDD3Q9Y3P4 386 aa12.1□□□□□ -0.47
COMMD4-225ENST00000569245 PPIAL4CA0A0B4J2A2 164 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 MEGF11A6BM72 1044 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 ANKRD61A6NGH8 418 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 A6NIN4 97 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 ANXA2P2A6NMY6 339 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 C3orf80F5H4A9 247 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 TRAPPC2LH3BP13 241 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 CST4P01036 141 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 CLEC2LP0C7M8 214 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 CD37P11049 281 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 ZNF182P17025 639 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-225ENST00000569245 RAB3AP20336 220 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 RAB3BP20337 219 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 EPHA1P21709 976 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 CPT2P23786 658 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 PSMD7P51665 324 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 PPP3R1P63098 170 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 MXD1Q05195 221 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 KCNJ8Q15842 424 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 CLVS2Q5SYC1 327 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 ZNF826PQ6ZT77 177 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 C1QL2Q7Z5L3 287 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 OR1M1Q8NGA1 313 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 SLC25A46Q96AG3 418 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 MICU1Q9BPX6 476 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 MRI1Q9BV20 369 aa12.09□□□□□ -0.47
COMMD4-225ENST00000569245 CCDC59Q9P031 241 aaKnown RBP12.09□□□□□ -0.47
COMMD4-225ENST00000569245 A0A0G2JK05 382 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 LGALS8O00214 317 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 SULT1B1O43704 296 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 FSTL3O95633 263 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 PTBP3O95758 552 aaKnown RBP12.08□□□□□ -0.48
COMMD4-225ENST00000569245 ALDOBP05062 364 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 ATF1P18846 271 aa12.08□□□□□ -0.48
COMMD4-225ENST00000569245 CD80P33681 288 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms