RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 BPIFB3P59826 476 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 RELBQ01201 579 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 ZNF91Q05481 1191 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 TMED1Q13445 227 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 OCLNQ16625 522 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 TMEM200BQ69YZ2 307 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 SLC25A26Q70HW3 274 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 MKXQ8IYA7 352 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 ENTHD1Q8IYW4 607 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 PQLC1Q8N2U9 271 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 ASCC1Q8N9N2 400 aaKnown RBP10.25□□□□□ -0.77
SMAD3-208ENST00000558827 C8orf46Q8TAG6 207 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 TNFRSF14Q92956 283 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 C4orf36Q96KX1 117 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 SPACA5Q96QH8 159 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 C9orf16Q9BUW7 83 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 ZNF747Q9BV97 191 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 PRDM13Q9H4Q3 707 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 ISG20L2Q9H9L3 353 aaKnown RBP10.25□□□□□ -0.77
SMAD3-208ENST00000558827 RASL12Q9NYN1 266 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 MTCH1Q9NZJ7 389 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 C1RLQ9NZP8 487 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 POLDIP2Q9Y2S7 368 aa10.25□□□□□ -0.77
SMAD3-208ENST00000558827 E9PI62 339 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 E9PQ18 207 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 J3QRE1 110 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 SLC1A7O00341 560 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 GPR37O15354 613 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 SLC16A6O15403 523 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 SPRY1O43609 319 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-208ENST00000558827 GPR137BO60478 399 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 SERPINA3P01011 423 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 ZNF20P17024 532 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 GABRB1P18505 474 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 SAA4P35542 130 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 NPBWR2P48146 333 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 RAG2P55895 527 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 ISL1P61371 349 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 RPL31P62899 125 aaKnown RBP10.24□□□□□ -0.77
SMAD3-208ENST00000558827 COL10A1Q03692 680 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 BLMHQ13867 455 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 ZNF273Q14593 569 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 LRRC36Q1X8D7 754 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 HCP5Q6MZN7 132 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 ZNF782Q6ZMW2 699 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-208ENST00000558827 Q6ZSR3 168 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 EGFL6Q8IUX8 553 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 ACBD7Q8N6N7 88 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 OR51A4Q8NGJ6 313 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 TBC1D15Q8TC07 691 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 SSMEM1Q8WWF3 244 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 BORCS8Q96FH0 119 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 ALG8Q9BVK2 526 aa10.24□□□□□ -0.77
SMAD3-208ENST00000558827 PKD1L1Q8TDX9 2849 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 IGKV1-9A0A0C4DH69 117 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 LOC100130705A0A1B0GUX0 176 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 NOS1APO75052 506 aaPredicted RBP10.23□□□□□ -0.77
SMAD3-208ENST00000558827 GATBO75879 557 aaKnown RBP10.23□□□□□ -0.77
SMAD3-208ENST00000558827 CLIC3O95833 236 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 PAHP00439 452 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 DBTP11182 482 aaKnown RBP10.23□□□□□ -0.77
SMAD3-208ENST00000558827 ATF1P18846 271 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 BCL3P20749 454 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 MPZP25189 248 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 IER3P46695 156 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 FUT6P51993 359 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 MTCP1P56278 107 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 EDDM3AQ14507 147 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 LY6EQ16553 131 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 TAF9Q16594 264 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 SMN1Q16637 294 aaKnown RBP10.23□□□□□ -0.77
SMAD3-208ENST00000558827 C11orf91Q3C1V1 193 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 TMEM244Q5VVB8 128 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 MEDAGQ5VYS4 303 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 ZNF676Q8N7Q3 588 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 TPRX1Q8N7U7 411 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 OR5D18Q8NGL1 313 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 RHOXF1Q8NHV9 184 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 EMG1Q92979 244 aaKnown RBP10.23□□□□□ -0.77
SMAD3-208ENST00000558827 PELI1Q96FA3 418 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 CEP19Q96LK0 163 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 PKIBQ9C010 78 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 CHST5Q9GZS9 411 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 CHST6Q9GZX3 395 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 RBFOX1Q9NWB1 397 aaKnown RBP10.23□□□□□ -0.77
SMAD3-208ENST00000558827 FAM118AQ9NWS6 357 aa10.23□□□□□ -0.77
SMAD3-208ENST00000558827 EXOGQ9Y2C4 368 aaKnown RBP10.23□□□□□ -0.77
SMAD3-208ENST00000558827 KIAA2026Q5HYC2 2103 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 TMEM82A0PJX8 343 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 DHRS7CA6NNS2 312 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 ANKRD65E5RJM6 399 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 M0R1W7 72 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 IGHA1P01876 353 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 TK1P04183 234 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 FBP1P09467 338 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 OCM2P0CE71 109 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 OCMP0CE72 109 aaPredicted RBP10.22□□□□□ -0.77
SMAD3-208ENST00000558827 UBCP0CG48 685 aaKnown RBP10.22□□□□□ -0.77
SMAD3-208ENST00000558827 AZGP1P25311 298 aaKnown RBP10.22□□□□□ -0.77
SMAD3-208ENST00000558827 BMXP51813 675 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms