RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 OR4Q2P0C623 313 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 CCNOP22674 350 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 GPR4P46093 362 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 RBX1P62877 108 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 TNXAQ16473 311 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 C18orf21Q32NC0 220 aaPredicted RBP2.73□□□□□ -1.97
SYNE2-210ENST00000553455 SYT6Q5T7P8 510 aaPredicted RBP2.73□□□□□ -1.97
SYNE2-210ENST00000553455 FAM104BQ5XKR9 115 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 NELFCDQ8IXH7 590 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 LYPD1Q8N2G4 141 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 ATPAF2Q8N5M1 289 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 ORAOV1Q8WV07 137 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 CDKL2Q92772 493 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 MSANTD3Q96H12 275 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 CPB2Q96IY4 423 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 BEX2Q9BXY8 128 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 FRMD8P1Q9BZ68 369 aaPredicted RBP2.73□□□□□ -1.97
SYNE2-210ENST00000553455 PRORYQ9H606 182 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 VCX3AQ9NNX9 186 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 SDHAF2Q9NX18 166 aa2.73□□□□□ -1.97
SYNE2-210ENST00000553455 MFNGO00587 321 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 CNMDO75829 334 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 ZMPSTE24O75844 475 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 DHRS3O75911 302 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 CD8AP01732 235 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 CCL2P13500 99 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 MPIP34949 423 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 TGM4P49221 684 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 RPL10AP62906 217 aaKnown RBP2.72□□□□□ -1.97
SYNE2-210ENST00000553455 C2orf80Q0P641 193 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 GUSBP1Q15486 140 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 IGFBP7Q16270 282 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 LIN9Q5TKA1 542 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 CASP12Q6UXS9 341 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 ST13P4Q8IZP2 240 aaPredicted RBP2.72□□□□□ -1.97
SYNE2-210ENST00000553455 SLC26A10Q8NG04 563 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 OR6K2Q8NGY2 324 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 DERL3Q96Q80 235 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 METTL26Q96S19 204 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 C12orf4Q9NQ89 552 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 ZNF302Q9NR11 478 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 IL37Q9NZH6 218 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 ANXA10Q9UJ72 324 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 KLF13Q9Y2Y9 288 aaPredicted RBP2.72□□□□□ -1.97
SYNE2-210ENST00000553455 TICRRQ7Z2Z1 1910 aa2.72□□□□□ -1.97
SYNE2-210ENST00000553455 MGAT4DA6NG13 374 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 IGHV1-46P01743 117 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 TPM1P09493 284 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 SEC11BP0C7V7 166 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 LCN1P31025 176 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 ATP5G2Q06055 141 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 MEF2CQ06413 473 aaPredicted RBP2.71□□□□□ -1.98
SYNE2-210ENST00000553455 TRDNQ13061 729 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 CEACAM16Q2WEN9 425 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 IDNKQ5T6J7 187 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 KCTD16Q68DU8 428 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 DAZ4Q86SG3 579 aaKnown RBP2.71□□□□□ -1.98
SYNE2-210ENST00000553455 RBM45Q8IUH3 476 aaKnown RBP2.71□□□□□ -1.98
SYNE2-210ENST00000553455 CCNYL1Q8N7R7 359 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 LRRC20Q8TCA0 184 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 YIPF6Q96EC8 236 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 SMIM8Q96KF7 97 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 RILPQ96NA2 401 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 CTRCQ99895 268 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 RTBDNQ9BSG5 229 aaPredicted RBP2.71□□□□□ -1.98
SYNE2-210ENST00000553455 MRPL20Q9BYC9 149 aaKnown RBP2.71□□□□□ -1.98
SYNE2-210ENST00000553455 ASB7Q9H672 318 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 DAZ1Q9NQZ3 744 aaKnown RBP2.71□□□□□ -1.98
SYNE2-210ENST00000553455 AGPAT3Q9NRZ7 376 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 CLEC2DQ9UHP7 191 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 AK9Q5TCS8 1911 aa2.71□□□□□ -1.98
SYNE2-210ENST00000553455 TEAD1P28347 426 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 RESP18Q5W5W9 173 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 FAM131AQ6UXB0 335 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 FAM231DQ6ZW35 169 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 ITPRIPQ8IWB1 547 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 LRRC8AQ8IWT6 810 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 ZNF555Q8NEP9 628 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 DOK4Q8TEW6 326 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 TMIGD2Q96BF3 282 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 C19orf60Q96EN9 201 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 C1orf50Q9BV19 199 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 RDH14Q9HBH5 336 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 STX18Q9P2W9 335 aaKnown RBP2.7□□□□□ -1.98
SYNE2-210ENST00000553455 STK38LQ9Y2H1 464 aa2.7□□□□□ -1.98
SYNE2-210ENST00000553455 SETD1AO15047 1707 aaKnown RBP2.7□□□□□ -1.98
SYNE2-210ENST00000553455 DYSFO75923 2080 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 LOC100506127A0A0U1RQW1 187 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 RAB19A4D1S5 217 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 ENSAO43768 121 aaKnown RBP2.69□□□□□ -1.98
SYNE2-210ENST00000553455 IGKV1-17P01599 117 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 OR5AC1P0C628 307 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 TNNC1P63316 161 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 Q3ZCU0 254 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 ZNF404Q494X3 552 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 FBXO48Q5FWF7 155 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 CLLU1OSQ5K130 101 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 TMEM136Q6ZRR5 245 aa2.69□□□□□ -1.98
SYNE2-210ENST00000553455 NT5DC3Q86UY8 548 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms