RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 OR10G3Q8NGC4 313 aa15.33■□□□□ 0.04
SYNE3-202ENST00000553340 LIME1Q9H400 295 aa15.33■□□□□ 0.04
SYNE3-202ENST00000553340 ASXL3Q9C0F0 2248 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 XRCC2O43543 280 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 ARG1P05089 322 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 NQO2P16083 231 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 TMEM176BQ3YBM2 270 aaPredicted RBP15.32■□□□□ 0.04
SYNE3-202ENST00000553340 PLXDC2Q6UX71 529 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 LYZL2Q7Z4W2 148 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 TSTD1Q8NFU3 115 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 C10orf35Q96D05 121 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 FAAP24Q9BTP7 215 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 RSRP1Q9BUV0 290 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 SUCNR1Q9BXA5 334 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 SEMA5BQ9P283 1151 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 MIOXQ9UGB7 285 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 FBXO7Q9Y3I1 522 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 AP4M1O00189 453 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 C1QL1O75973 258 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 OR8U8P0C7N1 319 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 EN2P19622 333 aaPredicted RBP15.32■□□□□ 0.04
SYNE3-202ENST00000553340 OR2B8PP59922 312 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 RAB1AP62820 205 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 ZNF239Q16600 458 aaKnown RBP15.32■□□□□ 0.04
SYNE3-202ENST00000553340 HIST2H3AQ71DI3 136 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.32■□□□□ 0.04
SYNE3-202ENST00000553340 LRTM2Q8N967 370 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 ZNF565Q8N9K5 539 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 GNRHR2Q96P88 292 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 NELFAQ9H3P2 528 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 HDGFL3Q9Y3E1 203 aa15.32■□□□□ 0.04
SYNE3-202ENST00000553340 NCOA6Q14686 2063 aaPredicted RBP15.32■□□□□ 0.04
SYNE3-202ENST00000553340 LOC102725191A0A1B0GVB3 256 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 OR5H15A6NDH6 313 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 H7C1Q1 480 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 TXNL1O43396 289 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 EIF2S3P41091 472 aaKnown RBP15.31■□□□□ 0.04
SYNE3-202ENST00000553340 RRADP55042 308 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 IL13RA2Q14627 380 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 KMT5CQ86Y97 462 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 HSD17B11Q8NBQ5 300 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 LFNGQ8NES3 379 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 OR2M3Q8NG83 312 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 METTL9Q9H1A3 318 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 SH3BGRL3Q9H299 93 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 AK3Q9UIJ7 227 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 VCANP13611 3396 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 A0A1W2PPE2 198 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 MSTNO14793 375 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 KLK2P20151 261 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 DUSP1P28562 367 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 OPRM1P35372 400 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 MTCP1P56278 107 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 STARD6P59095 220 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 RHBDD2Q6NTF9 364 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 FBXW12Q6X9E4 464 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 SYT13Q7L8C5 426 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 DTX1Q86Y01 620 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 CCDC54Q8NEL0 328 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 SLC22A8Q8TCC7 542 aa15.31■□□□□ 0.04
SYNE3-202ENST00000553340 NXT1Q9UKK6 140 aaKnown RBP15.31■□□□□ 0.04
SYNE3-202ENST00000553340 IGLV3-12A0A075B6K2 115 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 ST8SIA3O43173 380 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 CLN5O75503 358 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 DTYMKP23919 212 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 LMO1P25800 156 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 CSNK1A1P48729 337 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 CHAF1BQ13112 559 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 TAF9Q16594 264 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 LIAT1Q6ZQX7 453 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 Q6ZSR3 168 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 SNIP1Q8TAD8 396 aaKnown RBP15.3■□□□□ 0.04
SYNE3-202ENST00000553340 HSF4Q9ULV5 492 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 NSG1A0A0A6YYJ2 146 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 OR13C7P0DN81 318 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 FXYD4P59646 89 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 ENDOGQ14249 297 aaKnown RBP15.3■□□□□ 0.04
SYNE3-202ENST00000553340 RSU1Q15404 277 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 LINC00469Q8N7U9 141 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 HPSE2Q8WWQ2 592 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 C18orf12Q96KH6 178 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 MYOTQ9UBF9 498 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 M0R135 149 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 OR2J2O76002 312 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 IFNA17P01571 189 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 CHATP28329 748 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 NHLH2Q02577 135 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 CLINT1Q14677 625 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 PHLDA2Q53GA4 152 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 TSPO2Q5TGU0 170 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 PPP1R3BQ86XI6 285 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 LGI3Q8N145 548 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 LRRC18Q8N456 261 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 OR52M1Q8NGK5 317 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 ZNF799Q96GE5 643 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 SLC2A9Q9NRM0 540 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 GPR173Q9NS66 373 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 B3GALT1Q9Y5Z6 326 aa15.3■□□□□ 0.04
SYNE3-202ENST00000553340 A0A1B0GW64 132 aa15.29■□□□□ 0.04
SYNE3-202ENST00000553340 ZFAND5O76080 213 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms