RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SC5DO75845 299 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 INMTO95050 263 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 PLAUP00749 431 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 ERCC1P07992 297 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-213ENST00000550629 CD55P08174 381 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 OCM2P0CE71 109 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 HSMCR30P0CW71 290 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 PAX1P15863 534 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 ANOS1P23352 680 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 PSMB9P28065 219 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 GNALP38405 381 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 ERVS71-1P61550 626 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 RPS11P62280 158 aaKnown RBP eCLIP4.86□□□□□ -1.63
SCAF11-213ENST00000550629 SLC3A1Q07837 685 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 NEDD8Q15843 81 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 TSTQ16762 297 aaKnown RBP4.86□□□□□ -1.63
SCAF11-213ENST00000550629 TIMM50Q3ZCQ8 353 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 Q499Y3 187 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 AWAT1Q58HT5 328 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 ARMCX4Q5H9R4 360 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 CLVS2Q5SYC1 327 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 LIPKQ5VXJ0 399 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 TMEM42Q69YG0 159 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 C11orf71Q6IPW1 123 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 PAMR1Q6UXH9 720 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 GDPGP1Q6ZNW5 385 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 TMEM200AQ86VY9 491 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 C11orf44Q8N8P7 122 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 OR56B2PQ8NGI1 322 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 OR5D14Q8NGL3 314 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 OR13C3Q8NGS6 347 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 IGFBPL1Q8WX77 278 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 RGP1Q92546 391 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-213ENST00000550629 NEUROG1Q92886 237 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 FAM71F1Q96KD3 344 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-213ENST00000550629 PDCD1LG2Q9BQ51 273 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 TRAF4Q9BUZ4 470 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-213ENST00000550629 CHST5Q9GZS9 411 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 UBTD1Q9HAC8 227 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 PLEKHA1Q9HB21 404 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 NEK6Q9HC98 313 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 TMEM100Q9NV29 134 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 CKLFQ9UBR5 152 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 ENPP5Q9UJA9 477 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 DHDHQ9UQ10 334 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 PIGLQ9Y2B2 252 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 N6AMT1Q9Y5N5 214 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 LRBAP50851 2863 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 FBN2P35556 2912 aa4.86□□□□□ -1.63
SCAF11-213ENST00000550629 TRBV5-7A0A0A0MS05 114 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 TRDV1A0A1B0GX56 115 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 ANKRD61A6NGH8 418 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 OR5B21A6NL26 309 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 ANXA2P2A6NMY6 339 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 C17orf100A8MU93 164 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 IFNL4K9M1U5 179 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 ARL6IP5O75915 188 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 PTBP3O95758 552 aaKnown RBP4.85□□□□□ -1.63
SCAF11-213ENST00000550629 CD8AP01732 235 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 TFAP2AP05549 437 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 SOD3P08294 240 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 UCHL1P09936 223 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 PRKACBP22694 351 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 TNFSF4P23510 183 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 ACKR3P25106 362 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 FGF9P31371 208 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-213ENST00000550629 RPL5P46777 297 aaKnown RBP4.85□□□□□ -1.63
SCAF11-213ENST00000550629 ALDH3B2P48448 385 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 MRPS11P82912 194 aaKnown RBP4.85□□□□□ -1.63
SCAF11-213ENST00000550629 TNK1Q13470 666 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 SSX1Q16384 188 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 ODF4Q2M2E3 257 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 CEACAM21Q3KPI0 293 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 TMEM255AQ5JRV8 349 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 OR2T2Q6IF00 324 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 UNQ9370/PRO34162Q6UXP9 181 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 LRP11Q86VZ4 500 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 SERPINA12Q8IW75 414 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 CDH26Q8IXH8 852 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 ZDHHC23Q8IYP9 409 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 RDH10Q8IZV5 341 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 ZFP41Q8N8Y5 198 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 DNAAF1Q8NEP3 725 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 OR5A2Q8NGI9 324 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 OR51A4Q8NGJ6 313 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 OR13F1Q8NGS4 319 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 TSEN15Q8WW01 171 aaKnown RBP4.85□□□□□ -1.63
SCAF11-213ENST00000550629 OR5P3Q8WZ94 311 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 TMEM106AQ96A25 262 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 SPSB1Q96BD6 273 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 CPNE2Q96FN4 548 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-213ENST00000550629 SNX22Q96L94 193 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 DERL3Q96Q80 235 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 HIST1H2AAQ96QV6 131 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 TMED9Q9BVK6 235 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 RTL8AQ9BWD3 113 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 PAPOLGQ9BWT3 736 aaKnown RBP4.85□□□□□ -1.63
SCAF11-213ENST00000550629 EGLN1Q9GZT9 426 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 RAB1BQ9H0U4 201 aa4.85□□□□□ -1.63
SCAF11-213ENST00000550629 CXorf56Q9H5V9 222 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms