RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RBP2P50120 134 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 TAS2R46P59540 309 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 ACER2Q5QJU3 275 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 ETV3LQ6ZN32 361 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 LYZL2Q7Z4W2 148 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 TMEM217Q8N7C4 229 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 OR2Y1Q8NGV0 311 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 WBP1Q96G27 269 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 RBM7Q9Y580 266 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 OR6C65A6NJZ3 312 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 MRPL33O75394 65 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 ZNF16P17020 682 aaPredicted RBP11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 ZNF273Q14593 569 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 AADACL3Q5VUY0 350 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 OR1F12Q8NHA8 337 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 RNASE11Q8TAA1 199 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 ZNF488Q96MN9 340 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 SHARPINQ9H0F6 387 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 IL36RNQ9UBH0 155 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 RCL1Q9Y2P8 373 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 AUP1Q9Y679 476 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 PKDREJQ9NTG1 2253 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 PCNX2A6NKB5 2137 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 HS3ST1O14792 307 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 SCGNO76038 276 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 CD8AP01732 235 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 CYB561P49447 251 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 HERV-K104P61576 105 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 PSG4Q00888 419 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 IKZF1Q13422 519 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 PABPC1L2AQ5JQF8 200 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 ARRDC1Q8N5I2 433 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 RTN4IP1Q8WWV3 396 aaPredicted RBP11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 ARL11Q969Q4 196 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 TLNRD1Q9H1K6 362 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 SLC7A11Q9UPY5 501 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 NOSIPQ9Y314 301 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 RFNGQ9Y644 331 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 PINLYPA6NC86 204 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 ZNF728P0DKX0 622 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 PVALBP20472 110 aaPredicted RBP11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 GPM6AP51674 278 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 CYCSP99999 105 aaKnown RBP11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 P4HA3Q7Z4N8 544 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 PUSL1Q8N0Z8 303 aaKnown RBP11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 ZIC4Q8N9L1 334 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 STOML3Q8TAV4 291 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 RDH5Q92781 318 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 HAS2Q92819 552 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 SLAMF9Q96A28 289 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 SCGB3A2Q96PL1 93 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 CHST5Q9GZS9 411 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 EIF5A2Q9GZV4 153 aaKnown RBP11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 DEPPQ9NTK1 212 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 IGKV1-27A0A075B6S5 117 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 TOX3O15405 576 aaPredicted RBP11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 NR2C1P13056 603 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 RPL12P30050 165 aaKnown RBP11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 HAAOP46952 286 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 RAC1P63000 192 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 EXT1Q16394 746 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 GGNBP1Q5YKI7 109 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 LYPD6Q86Y78 171 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 RNF141Q8WVD5 230 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 PTX4Q96A99 478 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 MARS2Q96GW9 593 aaKnown RBP11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 KCNIP3Q9Y2W7 256 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 LOXL2Q9Y4K0 774 aa11.9□□□□□ -0.5
PRPF40B-209ENST00000548825 ZNF587BE7ETH6 402 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 ATG12O94817 140 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 ONECUT2O95948 504 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 MELTFP08582 738 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 FPR2P25090 351 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 TLE1Q04724 770 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 IGSF11Q5DX21 431 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 DCAF12Q5T6F0 453 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 HSD17B13Q7Z5P4 300 aaPredicted RBP11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 SKA3Q8IX90 412 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 CNTNAP3BQ96NU0 1288 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 ARRDC1-AS1Q9H2J1 176 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 PROK2Q9HC23 129 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 TTLL8A6PVC2 850 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 H3BP45 60 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 M0R036 132 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 DAOP14920 347 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 RAB11FIP2Q7L804 512 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 CALHM1Q8IU99 346 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 BSCL2Q96G97 398 aaPredicted RBP11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 C2orf50Q96LR7 162 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 FBXL17Q9UF56 701 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 MEMO1Q9Y316 297 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 TECTAO75443 2155 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 GTF3C1Q12789 2109 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 EIF3GO75821 320 aaKnown RBP eCLIP11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 IL11RAQ14626 422 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 TGIF1Q15583 401 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 OR56B2PQ8NGI1 322 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 CD300LFQ8TDQ1 290 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 IMMP1LQ96LU5 166 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms