RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 MYEF2Q9P2K5 600 aaKnown RBP6.97□□□□□ -1.29
VPS13D-211ENST00000543710 ICAM5Q9UMF0 924 aa6.97□□□□□ -1.29
VPS13D-211ENST00000543710 STARD10Q9Y365 291 aa6.97□□□□□ -1.29
VPS13D-211ENST00000543710 OR51B4Q9Y5P0 310 aa6.97□□□□□ -1.29
VPS13D-211ENST00000543710 PLXNB2O15031 1838 aa6.97□□□□□ -1.29
VPS13D-211ENST00000543710 C3orf85A0A1B0GTC6 90 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 A0A1B0GVG6 124 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 OR5H8P0DN80 308 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 CEACAM3P40198 252 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 GALR1P47211 349 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 NPBWR1P48145 328 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 RPS4XP62701 263 aaKnown RBP6.96□□□□□ -1.29
VPS13D-211ENST00000543710 KCNAB1Q14722 419 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 WDR74Q6RFH5 385 aaPredicted RBP6.96□□□□□ -1.29
VPS13D-211ENST00000543710 ZNF683Q8IZ20 524 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 OR10V1Q8NGI7 309 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 SPACA9Q96E40 222 aaPredicted RBP6.96□□□□□ -1.29
VPS13D-211ENST00000543710 COX14Q96I36 57 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 AAMDCQ9H7C9 122 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 PCOLCE2Q9UKZ9 415 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 LRP12Q9Y561 859 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 FAM74A7A6NL05 159 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 FGF17O60258 216 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 FAM87AP0C7U9 286 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 PRTGQ2VWP7 1150 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 ACER2Q5QJU3 275 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 Q6ZPB1 254 aaPredicted RBP6.96□□□□□ -1.29
VPS13D-211ENST00000543710 OVCH2Q7RTZ1 564 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 SLC36A1Q7Z2H8 476 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 LSMEM1Q8N8F7 131 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 SLC16A11Q8NCK7 471 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 STXBP6Q8NFX7 210 aa6.96□□□□□ -1.29
VPS13D-211ENST00000543710 OOEPA6NGQ2 149 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 ALG1L2C9J202 215 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 CTAG2O75638 210 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 AKR7A3O95154 331 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 ACTL6AO96019 429 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 OR13C7P0DN81 318 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 EDN3P14138 238 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 GNB3P16520 340 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 GNG3P63215 75 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 INPP5JQ15735 1006 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-211ENST00000543710 MPV17LQ2QL34 196 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 PSMG4Q5JS54 123 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 OR8B3Q8NGG8 313 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 OR51H1Q8NH63 302 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 OR8B2Q96RD0 313 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 PMCHL2Q9BQD1 86 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 VAMP8Q9BV40 100 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 PLA2G2FQ9BZM2 168 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 TAAR3PQ9P1P4 343 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 SIGLEC7Q9Y286 467 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 TRAPPC1Q9Y5R8 145 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 A0A0B4J203 849 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 CLDN34H7C241 214 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 SIAH2O43255 324 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 KRASP01116 189 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 NDUFB7P17568 137 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 PRRX1P54821 245 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 ZNF121P58317 390 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-211ENST00000543710 TMEM241Q24JQ0 296 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 DMKNQ6E0U4 476 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-211ENST00000543710 SSX7Q7RTT5 188 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 SLC25A42Q86VD7 318 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 OR2Y1Q8NGV0 311 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 ABHD1Q96SE0 405 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 UQCC1Q9NVA1 299 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 CASP8AP2Q9UKL3 1982 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 ZFP92A6NM28 416 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 NDUFB3O43676 98 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 GATCO43716 136 aaKnown RBP6.96□□□□□ -1.3
VPS13D-211ENST00000543710 IGHMP01871 453 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 ZGLP1P0C6A0 271 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 ATP5IP56385 69 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-211ENST00000543710 TMEM81Q6P7N7 255 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 MYPOPQ86VE0 399 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-211ENST00000543710 C17orf78Q8N4C9 275 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 GPR32P1Q8NGA4 272 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 OR4F17Q8NGA8 305 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 FBLIM1Q8WUP2 373 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 CABLES2Q9BTV7 478 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 MMP25Q9NPA2 562 aa6.96□□□□□ -1.3
VPS13D-211ENST00000543710 A0A1B0GU03 582 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 NCBP2LA6PVI3 153 aaKnown RBP6.95□□□□□ -1.3
VPS13D-211ENST00000543710 H7C1C5 153 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 MFNGO00587 321 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 TMPRSS11DO60235 418 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 PEX11BO96011 259 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 GUK1Q16774 197 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 ANKRD37Q7Z713 158 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 FADS6Q8N9I5 356 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 OR8G5Q8NG78 346 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 HSD17B8Q92506 261 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 ERGIC1Q969X5 290 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 DERL3Q96Q80 235 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 SIGLEC11Q96RL6 698 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 PTDSS2Q9BVG9 487 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 CTSFQ9UBX1 484 aa6.95□□□□□ -1.3
VPS13D-211ENST00000543710 IGHV1OR21-1A0A087WYE8 117 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms