RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 OR8G1Q15617 311 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 GPR157Q5UAW9 335 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 C1orf189Q5VU69 101 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 TCEAL6Q6IPX3 200 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 TMEM217Q8N7C4 229 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 TSLPQ969D9 159 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 TUBD1Q9UJT1 453 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 MASP2O00187 686 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 OPN1LWP04000 364 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 CLRN1P58418 232 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 SPCS3P61009 180 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 RAB11AP62491 216 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 GRINAQ7Z429 371 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 TMEM123Q8N131 208 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 FRZBQ92765 325 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 PECRQ9BY49 303 aa11.3□□□□□ -0.6
SFSWAP-209ENST00000540469 TDRD6O60522 2096 aaKnown RBP11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 FAM24AA6NFZ4 105 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 PHF1O43189 567 aaPredicted RBP11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 TNFSF12O43508 249 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 CTSDP07339 412 aaPredicted RBP11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 FCGR2AP12318 317 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 DUSP1P28562 367 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 OR1D4P47884 311 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 SUCLG1P53597 346 aaKnown RBP11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 HSF1Q00613 529 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 ZNF266Q14584 549 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 HIKESHIQ53FT3 197 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 OR5AS1Q8N127 324 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 PIGTQ969N2 578 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 SCRT1Q9BWW7 348 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 REV3LO60673 3130 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 DHRS7CA6NNS2 312 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 FTCDNL1E5RQL4 147 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 FGF7P21781 194 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 CDAP32320 146 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 SFTPDP35247 375 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 ALDH3B1P43353 468 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 PCK2Q16822 640 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 OR8B12Q8NGG6 310 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 OR52M1Q8NGK5 317 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 PGAM5Q96HS1 289 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 IGKV1D-8A0A087WSZ0 117 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 HOXB2P14652 356 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 FOLR1P15328 257 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 ATP6V0CP27449 155 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 ECI1P42126 302 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 KISS1Q15726 138 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 CDCP2Q5VXM1 449 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 M1APQ8TC57 530 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 ASB10Q8WXI3 467 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 VWCEQ96DN2 955 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 TOX2Q96NM4 488 aa11.29□□□□□ -0.6
SFSWAP-209ENST00000540469 CCDC187A0A096LP49 1063 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 CRYM-AS1A6NIL9 109 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 SERPINE3A8MV23 424 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 PGA4P0DJD7 388 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 PGA5P0DJD9 388 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 IL2RGP31785 369 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 LRRC18Q8N456 261 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 ADAMTS18Q8TE60 1221 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 FBLN5Q9UBX5 448 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 MYO7BQ6PIF6 2116 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 ONECUT2O95948 504 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 CELA2BP08218 269 aaPredicted RBP11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 SFTPCP11686 197 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 RRADP55042 308 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 HSD11B2P80365 405 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 EWSR1Q01844 656 aaKnown RBP eCLIP11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 H1FNTQ75WM6 255 aaPredicted RBP11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 C1QL2Q7Z5L3 287 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 SLC38A9Q8NBW4 561 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 RHBDD1Q8TEB9 315 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 LIN37Q96GY3 246 aaPredicted RBP11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 BMFQ96LC9 184 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 MAGT1Q9H0U3 335 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 LANCL2Q9NS86 450 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 LRFN1Q9P244 771 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 COPS7AQ9UBW8 275 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 PCNX3Q9H6A9 2034 aa11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 SPTBN5Q9NRC6 3674 aaKnown RBP11.28□□□□□ -0.6
SFSWAP-209ENST00000540469 FAM221AA4D161 298 aa11.27□□□□□ -0.6
SFSWAP-209ENST00000540469 FRG2CA6NGY1 282 aa11.27□□□□□ -0.6
SFSWAP-209ENST00000540469 NXPH3O95157 252 aa11.27□□□□□ -0.6
SFSWAP-209ENST00000540469 TNFP01375 233 aa11.27□□□□□ -0.6
SFSWAP-209ENST00000540469 FZD2Q14332 565 aa11.27□□□□□ -0.6
SFSWAP-209ENST00000540469 Q6ZSR6 202 aa11.27□□□□□ -0.6
SFSWAP-209ENST00000540469 SPPL3Q8TCT6 385 aa11.27□□□□□ -0.6
SFSWAP-209ENST00000540469 PTPMT1Q8WUK0 201 aaPredicted RBP11.27□□□□□ -0.6
SFSWAP-209ENST00000540469 NAA60Q9H7X0 242 aa11.27□□□□□ -0.6
SFSWAP-209ENST00000540469 GNG13Q9P2W3 67 aa11.27□□□□□ -0.6
SFSWAP-209ENST00000540469 TBX21Q9UL17 535 aa11.27□□□□□ -0.6
SFSWAP-209ENST00000540469 MED12Q93074 2177 aa11.27□□□□□ -0.61
SFSWAP-209ENST00000540469 A6NCN8 305 aa11.27□□□□□ -0.61
SFSWAP-209ENST00000540469 ZFP92A6NM28 416 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms