RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 PMCHP20382 165 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 DAPP51397 102 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 IAH1Q2TAA2 248 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 ANKRD55Q3KP44 614 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 DBX2Q6ZNG2 339 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 ZNF561Q8N587 486 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 CA5BP1Q8WTZ4 195 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 SCMH1Q96GD3 660 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 ANXA10Q9UJ72 324 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 B9D1Q9UPM9 204 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 ZNF860A6NHJ4 632 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 M0R082 166 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 MT-CO3P00414 261 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 MMP7P09237 267 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 USF1P22415 310 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 GIFP27352 417 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 OPRL1P41146 370 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 NPBWR1P48145 328 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 NKX2-5P52952 324 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 ZXDAP98168 799 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 B4GALNT1Q00973 533 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 FABP9Q0Z7S8 132 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 PRDX4Q13162 271 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 ACER2Q5QJU3 275 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 RPL7L1Q6DKI1 246 aaKnown RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 MRM1Q6IN84 353 aaKnown RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 ZBTB44Q8NCP5 570 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 LGALS14Q8TCE9 139 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 RXFP4Q8TDU9 374 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 DPF1Q92782 380 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 RAB24Q969Q5 203 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 MRPL24Q96A35 216 aaKnown RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 PBOV1Q9GZY1 135 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 LPAR2Q9HBW0 351 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 GDF2Q9UK05 429 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 RHBDD3Q9Y3P4 386 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 MS4A18H0YCH9 400 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 RPS2P15880 293 aaKnown RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 GLRA1P23415 457 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 MSX2P35548 267 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 SOX2P48431 317 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 CEBPGP53567 150 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 HYAL1Q12794 435 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 MYBPHQ13203 477 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 MS4A18Q3C1V0 323 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 HSD17B11Q8NBQ5 300 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 OR8B3Q8NGG8 313 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 HGDQ93099 445 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 OR8B2Q96RD0 313 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 FGF22Q9HCT0 170 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 IL36GQ9NZH8 169 aa4.4□□□□□ -1.71
PTPN13-209ENST00000511467 NKX1-2Q9UD57 310 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 SOX21Q9Y651 276 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-209ENST00000511467 PRRC2AP48634 2157 aaKnown RBP4.39□□□□□ -1.71
PTPN13-209ENST00000511467 CACNA1AO00555 2505 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 IGLV3-32A0A0A0MS00 114 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 ANGPTL7O43827 346 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 FGF17O60258 216 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 GGCTO75223 188 aaKnown RBP4.39□□□□□ -1.71
PTPN13-209ENST00000511467 PNPP00491 289 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 SNRNP70P08621 437 aaKnown RBP4.39□□□□□ -1.71
PTPN13-209ENST00000511467 PTGFRP43088 359 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 C19orf57Q0VDD7 668 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 TTC9BQ8N6N2 239 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 FADS6Q8N9I5 356 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 YIPF5Q969M3 257 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 PRR11Q96HE9 360 aaPredicted RBP4.39□□□□□ -1.71
PTPN13-209ENST00000511467 ZNF778Q96MU6 729 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 AMBRA1Q9C0C7 1298 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 FBXO34Q9NWN3 711 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 SNX11Q9Y5W9 270 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 UPK1AO00322 258 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 PPP6CO00743 305 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 NDUFB6O95139 128 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 CLDN1O95832 211 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 DAOP14920 347 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 GAMTQ14353 236 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 PRTGQ2VWP7 1150 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 NSUN5P2Q63ZY6 315 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 PARM1Q6UWI2 310 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 MUC15Q8N387 334 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 ZNF441Q8N8Z8 693 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 DUSP18Q8NEJ0 188 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 OR4S1Q8NGB4 309 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 ALG14Q96F25 216 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 P2RX4Q99571 388 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 TMEM147Q9BVK8 224 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 LHX9Q9NQ69 397 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 TMEM38BQ9NVV0 291 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 STARD10Q9Y365 291 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 AK6Q9Y3D8 172 aaKnown RBP4.39□□□□□ -1.71
PTPN13-209ENST00000511467 FLVCR1Q9Y5Y0 555 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 SONP18583 2426 aaKnown RBP4.39□□□□□ -1.71
PTPN13-209ENST00000511467 PLPP3O14495 311 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 OGG1O15527 345 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 FOSL1P15407 271 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 SERPINA2P20848 420 aa4.39□□□□□ -1.71
PTPN13-209ENST00000511467 CNN1P51911 297 aaKnown RBP4.39□□□□□ -1.71
PTPN13-209ENST00000511467 NTHL1P78549 312 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms