RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CCDC107Q8WV48 283 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 DACT3Q96B18 629 aaPredicted RBP8.83□□□□□ -1
HDAC3-214ENST00000495485 ZNF75AQ96N20 296 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 SCGB3A2Q96PL1 93 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 PRRT1Q99946 306 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 GAL3ST1Q99999 423 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 MICU1Q9BPX6 476 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 SLC25A21Q9BQT8 299 aaPredicted RBP8.83□□□□□ -1
HDAC3-214ENST00000495485 NEURL2Q9BR09 285 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 RTL8AQ9BWD3 113 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 OR10A4Q9H209 315 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 KCNK15Q9H427 330 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 BANF2Q9H503 90 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 NUDT15Q9NV35 164 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 PLEKHJ1Q9NW61 149 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 ELOVL5Q9NYP7 299 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 MRPL15Q9P015 296 aaKnown RBP8.83□□□□□ -1
HDAC3-214ENST00000495485 JKAMPQ9P055 326 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 Q9UFV3 132 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 ZNF221Q9UK13 617 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 HSF4Q9ULV5 492 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 NBPF19A0A087WUL8 3843 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 TMEM235A6NFC5 223 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 OR5H1A6NKK0 313 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 TRAPPC2LH3BP13 241 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 SSX4O60224 188 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 TOXO94900 526 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 GCH1P30793 250 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 PMELP40967 661 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 ZP1P60852 638 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 GNG3P63215 75 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 FOXF2Q12947 444 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 TNK1Q13470 666 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 ZNF718Q3SXZ3 478 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 RNASE10Q5GAN6 216 aaKnown RBP8.82□□□□□ -1
HDAC3-214ENST00000495485 SFRP4Q6FHJ7 346 aaPredicted RBP8.82□□□□□ -1
HDAC3-214ENST00000495485 C3P1Q6ZMU1 363 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 LINC00596Q86U02 117 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 TMEM200AQ86VY9 491 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 Q8IYB0 196 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 OSR2Q8N2R0 312 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 SPERTQ8NA61 448 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 OR5D18Q8NGL1 313 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 OR1J1Q8NGS3 322 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 OR8S1Q8NH09 359 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 OR51F2Q8NH61 342 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 MED30Q96HR3 178 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 RNF170Q96K19 258 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 C1orf147Q96MC9 270 aaPredicted RBP8.82□□□□□ -1
HDAC3-214ENST00000495485 PSMG3-AS1Q96PY0 264 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 OCSTAMPQ9BR26 566 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 C20orf85Q9H1P6 137 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 OPN3Q9H1Y3 402 aaPredicted RBP8.82□□□□□ -1
HDAC3-214ENST00000495485 MED28Q9H204 178 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 NOX3Q9HBY0 568 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 EDARQ9UNE0 448 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 SPG11Q96JI7 2443 aa8.82□□□□□ -1
HDAC3-214ENST00000495485 PLCE1Q9P212 2302 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 TRAV6A0A075B6T7 132 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 PQLC2LA1A4F0 135 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 ZNF503-AS2A6NEH8 195 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 SMPD2O60906 423 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 PEX14O75381 377 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 NDUFB6O95139 128 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 NGFP01138 241 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 CD74P04233 296 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 PPP3CBP16298 524 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 GNB3P16520 340 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 BMP5P22003 454 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 BTCP35070 178 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 TAS2R46P59540 309 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 SELENOVP59797 346 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 RRAS2P62070 204 aaPredicted RBP8.81□□□□□ -1
HDAC3-214ENST00000495485 RPS23P62266 143 aaKnown RBP8.81□□□□□ -1
HDAC3-214ENST00000495485 RPRMLQ8N4K4 120 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 WDR31Q8NA23 367 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 TMEM104Q8NE00 496 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 OR4C16Q8NGL9 310 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 RNASE6Q93091 150 aaKnown RBP8.81□□□□□ -1
HDAC3-214ENST00000495485 UPRTQ96BW1 309 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 CMBLQ96DG6 245 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 MS4A3Q96HJ5 214 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 Q96M66 194 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 NKX3-1Q99801 234 aaPredicted RBP8.81□□□□□ -1
HDAC3-214ENST00000495485 SPOCK3Q9BQ16 436 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 PKIBQ9C010 78 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 POLDIP2Q9Y2S7 368 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 ALG5Q9Y673 324 aa8.81□□□□□ -1
HDAC3-214ENST00000495485 HEATR1Q9H583 2144 aaKnown RBP8.81□□□□□ -1
HDAC3-214ENST00000495485 NAV2Q8IVL1 2488 aa8.8□□□□□ -1
HDAC3-214ENST00000495485 UBE2QL1A1L167 161 aa8.8□□□□□ -1
HDAC3-214ENST00000495485 TMEM210A6NLX4 147 aa8.8□□□□□ -1
HDAC3-214ENST00000495485 A8MXE2 369 aa8.8□□□□□ -1
HDAC3-214ENST00000495485 IQCF6A8MYZ5 107 aa8.8□□□□□ -1
HDAC3-214ENST00000495485 ZNF732B4DXR9 585 aa8.8□□□□□ -1
HDAC3-214ENST00000495485 SOCS1O15524 211 aa8.8□□□□□ -1
HDAC3-214ENST00000495485 ZNHIT1O43257 154 aa8.8□□□□□ -1
HDAC3-214ENST00000495485 SPRY1O43609 319 aaPredicted RBP8.8□□□□□ -1
HDAC3-214ENST00000495485 IGLV1-44P01699 117 aa8.8□□□□□ -1
HDAC3-214ENST00000495485 CRYAAP02489 173 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms