RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 TMEM104Q8NE00 496 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 CCL17Q92583 94 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 SEH1LQ96EE3 360 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 CEP19Q96LK0 163 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 CXorf56Q9H5V9 222 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 TMEM272A0A1B0GTI8 110 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 VSIG8P0DPA2 414 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 CD80P33681 288 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 ZNF404Q494X3 552 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 FAM201AQ5SY85 155 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 OR11L1Q8NGX0 322 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 IGFBPL1Q8WX77 278 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 WDR13Q9H1Z4 485 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 IL36RNQ9UBH0 155 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 AKAP6Q13023 2319 aa16.33■□□□□ 0.21
USP39-218ENST00000493829 TANC2Q9HCD6 1990 aa16.33■□□□□ 0.2
USP39-218ENST00000493829 OVOL3O00110 214 aa16.33■□□□□ 0.2
USP39-218ENST00000493829 MPIG6BO95866 241 aa16.33■□□□□ 0.2
USP39-218ENST00000493829 CSTBP04080 98 aaKnown RBP16.33■□□□□ 0.2
USP39-218ENST00000493829 PGA5P0DJD9 388 aa16.33■□□□□ 0.2
USP39-218ENST00000493829 IRF2P14316 349 aa16.33■□□□□ 0.2
USP39-218ENST00000493829 EFNB2P52799 333 aa16.33■□□□□ 0.2
USP39-218ENST00000493829 UNC119Q13432 240 aa16.33■□□□□ 0.2
USP39-218ENST00000493829 CARTPTQ16568 116 aa16.33■□□□□ 0.2
USP39-218ENST00000493829 SAMD12Q8N8I0 201 aa16.33■□□□□ 0.2
USP39-218ENST00000493829 ZSCAN4Q8NAM6 433 aaPredicted RBP16.33■□□□□ 0.2
USP39-218ENST00000493829 PXT1Q8NFP0 134 aa16.33■□□□□ 0.2
USP39-218ENST00000493829 EMG1Q92979 244 aaKnown RBP16.33■□□□□ 0.2
USP39-218ENST00000493829 YIPF5Q969M3 257 aa16.33■□□□□ 0.2
USP39-218ENST00000493829 DYSFO75923 2080 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 RGS5O15539 181 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 KDM4BO94953 1096 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 NXPH2O95156 264 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 UBBP0CG47 229 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 DAOP14920 347 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 PRKACAP17612 351 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 SAXO1Q8IYX7 474 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 POC1AQ8NBT0 407 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 NEU4Q8WWR8 484 aaPredicted RBP16.32■□□□□ 0.2
USP39-218ENST00000493829 NRIP2Q9BQI9 281 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 CST11Q9H112 138 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 ABRACLQ9P1F3 81 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 RNF7Q9UBF6 113 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 HECTD1Q9ULT8 2610 aa16.32■□□□□ 0.2
USP39-218ENST00000493829 IGHV3OR15-7A0A075B7D8 119 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 HPGDSO60760 199 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 MGMTP16455 207 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 GLRA1P23415 457 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 COL8A2P25067 703 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 MADCAM1Q13477 382 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 HFEQ30201 348 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 PIGYQ3MUY2 71 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 SFRP4Q6FHJ7 346 aaPredicted RBP16.31■□□□□ 0.2
USP39-218ENST00000493829 ASCL4Q6XD76 172 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 GCSAMQ8N6F7 178 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 Q8TCH9 128 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 KCTD12Q96CX2 325 aaKnown RBP16.31■□□□□ 0.2
USP39-218ENST00000493829 PERPQ96FX8 193 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 SELENOIQ9C0D9 397 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 TMEM106BQ9NUM4 274 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 PTTG2Q9NZH5 202 aa16.31■□□□□ 0.2
USP39-218ENST00000493829 LRRC30A6NM36 301 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 CTDSP2O14595 271 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 IGHV4-39P01824 125 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 BMXP51813 675 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 QRFPP83859 136 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 MZT2AQ6P582 158 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 LAX1Q8IWV1 398 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 DTX3Q8N9I9 347 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 ACOT12Q8WYK0 555 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 HPS1Q92902 700 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 ERGIC1Q969X5 290 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 SLC25A38Q96DW6 304 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 TMEM59Q9BXS4 323 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 TMEM14DPA8MWL7 114 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 TFF1P04155 84 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 DUSP1P28562 367 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 EFNA4P52798 201 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 PDCD1Q15116 288 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 FAM58AQ8N1B3 248 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 OSR2Q8N2R0 312 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 NICN1Q9BSH3 213 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 IL36GQ9NZH8 169 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 GHRLQ9UBU3 117 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 SPATA2Q9UM82 520 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 ETV7Q9Y603 341 aa16.3■□□□□ 0.2
USP39-218ENST00000493829 SRRM5B3KS81 715 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 LDLRAD4O15165 306 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 EIF4EP06730 217 aaKnown RBP16.29■□□□□ 0.2
USP39-218ENST00000493829 GTF2F2P13984 249 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 CEBPDP49716 269 aaPredicted RBP16.29■□□□□ 0.2
USP39-218ENST00000493829 ERVK11-1P61568 191 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 OR2W3Q7Z3T1 314 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 DEFB108BQ8NET1 73 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 OR5T2Q8NGG2 359 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 OR10Z1Q8NGY1 313 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 KCNG3Q8TAE7 436 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 RDH5Q92781 318 aa16.29■□□□□ 0.2
USP39-218ENST00000493829 NXF2Q9GZY0 626 aaKnown RBP16.29■□□□□ 0.2
USP39-218ENST00000493829 RHBDL2Q9NX52 303 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms