RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 OR2T5Q6IEZ7 315 aa10.96□□□□□ -0.65
SAMM50-204ENST00000493161 CPOQ8IVL8 374 aa10.96□□□□□ -0.65
SAMM50-204ENST00000493161 DEFB107AQ8IZN7 70 aa10.96□□□□□ -0.65
SAMM50-204ENST00000493161 OR10G2Q8NGC3 310 aa10.96□□□□□ -0.65
SAMM50-204ENST00000493161 OR2T29Q8NH02 315 aa10.96□□□□□ -0.65
SAMM50-204ENST00000493161 MYDGFQ969H8 173 aa10.96□□□□□ -0.65
SAMM50-204ENST00000493161 FEVQ99581 238 aa10.96□□□□□ -0.65
SAMM50-204ENST00000493161 REEP1Q9H902 201 aa10.96□□□□□ -0.65
SAMM50-204ENST00000493161 SH2D7A6NKC9 451 aaPredicted RBP10.95□□□□□ -0.66
SAMM50-204ENST00000493161 FAM90A22PA8MWA6 464 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 F8VVB4 439 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 F8VWA3 439 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 ZNF737O75373 536 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 MRPL3P09001 348 aaKnown RBP10.95□□□□□ -0.66
SAMM50-204ENST00000493161 SLC2A5P22732 501 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 EDDM3BP56851 147 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 OR12D2P58182 307 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 ERVK11-1P61568 191 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 GINS1Q14691 196 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 ZNF684Q5T5D7 378 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 ASRGL1Q7L266 308 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 CENPVQ7Z7K6 275 aaPredicted RBP10.95□□□□□ -0.66
SAMM50-204ENST00000493161 TMEM179BQ7Z7N9 219 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 ANGPTL5Q86XS5 388 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 ZNF573Q86YE8 665 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 ASCC1Q8N9N2 400 aaKnown RBP10.95□□□□□ -0.66
SAMM50-204ENST00000493161 RCC1LQ96I51 464 aaKnown RBP10.95□□□□□ -0.66
SAMM50-204ENST00000493161 ACTR3BQ9P1U1 418 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 ENPP5Q9UJA9 477 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 LAMP5Q9UJQ1 280 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 SLC22A13Q9Y226 551 aa10.95□□□□□ -0.66
SAMM50-204ENST00000493161 ACOD1A6NK06 481 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 MAGEB4O15481 346 aaPredicted RBP10.94□□□□□ -0.66
SAMM50-204ENST00000493161 PRODHO43272 600 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 MMP23AO75900 390 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 TTRP02766 147 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 ATP6V1B1P15313 513 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 RPS7P62081 194 aaKnown RBP10.94□□□□□ -0.66
SAMM50-204ENST00000493161 ACTA2P62736 377 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 ACTG2P63267 376 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 ACTC1P68032 377 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 ACTA1P68133 377 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 EGFEM1PQ0D2K5 195 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 TMEM42Q69YG0 159 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 BAIAP2L2Q6UXY1 529 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 TPRX1Q8N7U7 411 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 WWC2-AS2Q96NR7 200 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 FAM107BQ9H098 131 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 COPS3Q9UNS2 423 aa10.94□□□□□ -0.66
SAMM50-204ENST00000493161 TSSC4Q9Y5U2 329 aaPredicted RBP10.94□□□□□ -0.66
SAMM50-204ENST00000493161 IGHV2-26A0A0B4J1V2 119 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 TMEM82A0PJX8 343 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 DHRS3O75911 302 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 INMTO95050 263 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 RBP4P02753 201 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 ALDOBP05062 364 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 LPLP06858 475 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 MPZP25189 248 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 ESRRGP62508 458 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 CD69Q07108 199 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 APOFQ13790 326 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 CLVS2Q5SYC1 327 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 TMEM236Q5W0B7 351 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 NDNFQ8TB73 568 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 GIPC3Q8TF64 312 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 ZNF714Q96N38 554 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 MAGIXQ9H6Y5 334 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 NUFIP1Q9UHK0 495 aaKnown RBP10.93□□□□□ -0.66
SAMM50-204ENST00000493161 TAGLN3Q9UI15 199 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 POLDIP2Q9Y2S7 368 aa10.93□□□□□ -0.66
SAMM50-204ENST00000493161 A0A1B0GTI1 187 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 CCDC182A6NF36 153 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 SRSF10O75494 262 aaKnown RBP10.92□□□□□ -0.66
SAMM50-204ENST00000493161 AMY1AP04745 511 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 AMY2AP04746 511 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 CCDC159P0C7I6 412 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 CDK5Q00535 292 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 MS4A2Q01362 244 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 ROM1Q03395 351 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 EDDM3AQ14507 147 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 ABCA11PQ4W5N1 156 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 SLC35D3Q5M8T2 416 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 MINOS1Q5TGZ0 78 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 DEGS2Q6QHC5 323 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 C16orf89Q6UX73 402 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 ETV3LQ6ZN32 361 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 PLEKHG7Q6ZR37 379 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 GDPD3Q7L5L3 318 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 ZNF676Q8N7Q3 588 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 LINC00482Q8N8I6 264 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 OR52N4Q8NGI2 321 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 OR4P4Q8NGL7 312 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 TRMT10AQ8TBZ6 339 aaKnown RBP10.92□□□□□ -0.66
SAMM50-204ENST00000493161 BCAS4Q8TDM0 211 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 B9D2Q9BPU9 175 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 MROQ9BYG7 248 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 YIPF3Q9GZM5 350 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 MTCH1Q9NZJ7 389 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 IL36RNQ9UBH0 155 aa10.92□□□□□ -0.66
SAMM50-204ENST00000493161 GTF2A1LQ9UNN4 478 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms