RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 FPR2P25090 351 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 PRDX4Q13162 271 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 TPBGQ13641 420 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 TRAM1Q15629 374 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 PLCXD3Q63HM9 321 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 MOB3CQ70IA8 216 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 NLRC3Q7RTR2 1065 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 FAM90A1Q86YD7 464 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 ZDHHC23Q8IYP9 409 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 SPERTQ8NA61 448 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 OR8B3Q8NGG8 313 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 RPS4Y2Q8TD47 263 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 PP6455Q8WZ26 134 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 THRSPQ92748 146 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 C10orf35Q96D05 121 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 PGLYRP3Q96LB9 341 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 DUX5Q96PT3 197 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 OR8B2Q96RD0 313 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 JMJD8Q96S16 334 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 MICU1Q9BPX6 476 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 NUDT16L1Q9BRJ7 211 aaKnown RBP10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 MRPS26Q9BYN8 205 aaKnown RBP10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 NEK6Q9HC98 313 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 ABCB9Q9NP78 766 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 CLN8Q9UBY8 286 aa10.53□□□□□ -0.72
SEC61A1-206ENST00000491668 A0A1B0GW55 424 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 ANKRD61A6NGH8 418 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 OOEPA6NGQ2 149 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 DNAJC9-AS1A6NH13 148 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 CST4P01036 141 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 DUX4L2P0CJ85 424 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 DUX4L3P0CJ86 424 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 DUX4L4P0CJ87 422 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 DUX4L5P0CJ88 424 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 DUX4L6P0CJ89 424 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 DUX4L7P0CJ90 424 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 PSMA1P25786 263 aaKnown RBP10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 MAPK3P27361 379 aaPredicted RBP10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 ACTG1P63261 375 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 DOC2BQ14184 412 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 Q499Y3 187 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 CEP78Q5JTW2 689 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 DUX4L9Q6RFH8 374 aaPredicted RBP10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 C12orf54Q6X4T0 127 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 C9orf139Q6ZV77 190 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 SERPINA12Q8IW75 414 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 FGFRL1Q8N441 504 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 OR5D14Q8NGL3 314 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 OR13C5Q8NGS8 318 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 RGP1Q92546 391 aaPredicted RBP10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 TMEM106AQ96A25 262 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 ITPKCQ96DU7 683 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 SEH1LQ96EE3 360 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 ADAT3Q96EY9 351 aaPredicted RBP10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 RTL8AQ9BWD3 113 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 GPR173Q9NS66 373 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 C14orf119Q9NWQ9 140 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 CKLFQ9UBR5 152 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 DUX4Q9UBX2 424 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 SLC7A11Q9UPY5 501 aa10.52□□□□□ -0.73
SEC61A1-206ENST00000491668 IGHV3OR15-7A0A075B7D8 119 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 MDFIC2A0A1B0GVS7 189 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 A6NLC8 198 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 ZNF879B4DU55 563 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 GYPAP02724 150 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 SFTPBP07988 381 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 AMY2BP19961 511 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 GABRA5P31644 462 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 FGF12P61328 243 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 PPP3R1P63098 170 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 CNN3Q15417 329 aaKnown RBP10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 ACSM3Q53FZ2 586 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 SYT6Q5T7P8 510 aaPredicted RBP10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 TEX36Q5VZQ5 186 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 BTNL3Q6UXE8 466 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 WDR82Q6UXN9 313 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 Q6ZSR3 168 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 OR1M1Q8NGA1 313 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 TAF15Q92804 592 aaKnown RBP eCLIP10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 GCDHQ92947 438 aaPredicted RBP10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 MUL1Q969V5 352 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 RNF170Q96K19 258 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 TECTBQ96PL2 329 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 OR14A2Q96R54 314 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 CHST5Q9GZS9 411 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 TLNRD1Q9H1K6 362 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 SCOCQ9UIL1 159 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 TRRAPQ9Y4A5 3859 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 VWFP04275 2813 aa10.51□□□□□ -0.73
SEC61A1-206ENST00000491668 TRAV40A0A0B4J280 105 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 FAM230AA0A1W2PPH8 454 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 A0A1W2PPK0 400 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 MAGEB3O15480 346 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 ADAM20O43506 726 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 SMIM18P0DKX4 95 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 MMP9P14780 707 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 RAB3AP20336 220 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 PRTN3P24158 256 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 GPM6AP51674 278 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 RPS25P62851 125 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 577.6 ms