RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 SLC7A11Q9UPY5 501 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 SUPT4H1P63272 117 aaKnown RBP11.24□□□□□ -0.61
SEC13-216ENST00000479868 FGL1Q08830 312 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 PPA1Q15181 289 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 RTL6Q6ICC9 239 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 BRICD5Q6PL45 260 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 ALKAL2Q6UX46 152 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 GSG1LQ6UXU4 331 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 TMEM17Q86X19 198 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 MED12LQ86YW9 2145 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 FBXL14Q8N1E6 418 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 OR56B2PQ8NGI1 322 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 DYRK2Q92630 601 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 WDYHV1Q96HA8 205 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 MICU1Q9BPX6 476 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 SULT4A1Q9BR01 284 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 REPIN1Q9BWE0 567 aaKnown RBP11.24□□□□□ -0.61
SEC13-216ENST00000479868 PRR13Q9NZ81 148 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 GLRA1P23415 457 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 CHATP28329 748 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 RRADP55042 308 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 RAB1AP62820 205 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 PMP22Q01453 160 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 TAGLNQ01995 201 aaKnown RBP11.24□□□□□ -0.61
SEC13-216ENST00000479868 SLC9A3R2Q15599 337 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 C11orf87Q6NUJ2 197 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 CLEC18BQ6UXF7 455 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 OSR2Q8N2R0 312 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 PXT1Q8NFP0 134 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 OR10AD1Q8NGE0 317 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 OR51F2Q8NH61 342 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 HSF4Q9ULV5 492 aa11.24□□□□□ -0.61
SEC13-216ENST00000479868 TRGV5A0A0B4J1U4 118 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 EEF1E1-BLOC1S5C9J1V9 151 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 NGFP01138 241 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 MPGP29372 298 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 SOX8P57073 446 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 RAB14P61106 215 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 PDCD1Q15116 288 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 BATF2Q8N1L9 274 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 PAPOLGQ9BWT3 736 aaKnown RBP11.23□□□□□ -0.61
SEC13-216ENST00000479868 ZDHHC11Q9H8X9 412 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 RDH8Q9NYR8 311 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 IL36GQ9NZH8 169 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 COMMD9Q9P000 198 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 PRELID1Q9Y255 219 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 ST3GAL6Q9Y274 331 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 SFT2D2O95562 160 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 COX5BP10606 129 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 CD82P27701 267 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 AGTR1P30556 359 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 OPRM1P35372 400 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 SERPINF1P36955 418 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 TNFSF10P50591 281 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 ATXN7L3Q14CW9 347 aaPredicted RBP11.23□□□□□ -0.61
SEC13-216ENST00000479868 HIKESHIQ53FT3 197 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 TMEM65Q6PI78 240 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 ZNF611Q8N823 705 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 TMEM178AQ8NBL3 297 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 TNRC6AQ8NDV7 1962 aaKnown RBP11.23□□□□□ -0.61
SEC13-216ENST00000479868 POM121L2Q96KW2 1035 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 TECTBQ96PL2 329 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 FGF23Q9GZV9 251 aaPredicted RBP11.23□□□□□ -0.61
SEC13-216ENST00000479868 ASCL3Q9NQ33 180 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 ZNF629Q9UEG4 869 aaPredicted RBP11.23□□□□□ -0.61
SEC13-216ENST00000479868 TNFSF18Q9UNG2 199 aa11.23□□□□□ -0.61
SEC13-216ENST00000479868 C13orf42A0A1B0GVH6 325 aa11.22□□□□□ -0.61
SEC13-216ENST00000479868 C5orf51A6NDU8 294 aa11.22□□□□□ -0.61
SEC13-216ENST00000479868 IL18BPO95998 194 aa11.22□□□□□ -0.61
SEC13-216ENST00000479868 SLC25A4P12235 298 aa11.22□□□□□ -0.61
SEC13-216ENST00000479868 NPBWR2P48146 333 aa11.22□□□□□ -0.61
SEC13-216ENST00000479868 DAZAP2Q15038 168 aaPredicted RBP11.22□□□□□ -0.61
SEC13-216ENST00000479868 SLC25A26Q70HW3 274 aa11.22□□□□□ -0.61
SEC13-216ENST00000479868 COMMD7Q86VX2 200 aa11.22□□□□□ -0.61
SEC13-216ENST00000479868 OR6K3Q8NGY3 331 aa11.22□□□□□ -0.61
SEC13-216ENST00000479868 SCGB3A2Q96PL1 93 aa11.22□□□□□ -0.61
SEC13-216ENST00000479868 CMSS1Q9BQ75 279 aaKnown RBP11.22□□□□□ -0.61
SEC13-216ENST00000479868 ANXA10Q9UJ72 324 aa11.22□□□□□ -0.61
SEC13-216ENST00000479868 STARD10Q9Y365 291 aa11.22□□□□□ -0.61
SEC13-216ENST00000479868 FAM221AA4D161 298 aa11.21□□□□□ -0.61
SEC13-216ENST00000479868 SLC22A20A6NK97 555 aa11.21□□□□□ -0.61
SEC13-216ENST00000479868 B3GALNT1O75752 331 aa11.21□□□□□ -0.61
SEC13-216ENST00000479868 RPS2P15880 293 aaKnown RBP11.21□□□□□ -0.61
SEC13-216ENST00000479868 WT1P19544 449 aaPredicted RBP11.21□□□□□ -0.61
SEC13-216ENST00000479868 ARR3P36575 388 aa11.21□□□□□ -0.61
SEC13-216ENST00000479868 CCL11P51671 97 aa11.21□□□□□ -0.61
SEC13-216ENST00000479868 PRDX4Q13162 271 aa11.21□□□□□ -0.61
SEC13-216ENST00000479868 ANKRD55Q3KP44 614 aa11.21□□□□□ -0.61
SEC13-216ENST00000479868 ZNF660Q6AZW8 331 aaPredicted RBP11.21□□□□□ -0.61
SEC13-216ENST00000479868 APOBEC3DQ96AK3 386 aaPredicted RBP11.21□□□□□ -0.61
SEC13-216ENST00000479868 ZNF2Q9BSG1 426 aaPredicted RBP11.21□□□□□ -0.61
SEC13-216ENST00000479868 RNF222A6NCQ9 220 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 CDK2AP1O14519 115 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 RRP8O43159 456 aaKnown RBP11.21□□□□□ -0.62
SEC13-216ENST00000479868 SS18L1O75177 396 aaPredicted RBP11.21□□□□□ -0.62
SEC13-216ENST00000479868 ADAP1O75689 374 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 SPDEFO95238 335 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 FCGR3AP08637 254 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 P2RX3P56373 397 aa11.21□□□□□ -0.62
SEC13-216ENST00000479868 RBM11P57052 281 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms