RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 BTF3L4Q96K17 158 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF488Q96MN9 340 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 TMEM56Q96MV1 263 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 OR2V2Q96R30 315 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 RASL11BQ9BPW5 248 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 COA1Q9GZY4 146 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 PCBD2Q9H0N5 130 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 OR51J1Q9H342 316 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 UGT1A7Q9HAW7 530 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 C12orf4Q9NQ89 552 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 FAM206AQ9NX38 181 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 IMPAD1Q9NX62 359 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 CMTM6Q9NX76 183 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 GLTPQ9NZD2 209 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 NYAP2Q9P242 653 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 RIMS3Q9UJD0 308 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 RAB22AQ9UL26 194 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 KLF12Q9Y4X4 402 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 OR51B2Q9Y5P1 312 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ZBED9Q6R2W3 1325 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 NEBP20929 6669 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 DENND4AQ7Z401 1863 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 DDX60LQ5H9U9 1706 aaKnown RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 IGHV4OR15-8A0A075B7B6 117 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 A0A0B4J2A0 478 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 TRBV5-4A0A0C4DH59 114 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 TINCRA0A1B0GVN0 87 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF729A6NN14 1252 aaPredicted RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 F5H5T6 163 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 M0R1B8 84 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 CDX4O14627 284 aaPredicted RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 TAAR5O14804 337 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 TNFRSF13BO14836 293 aaPredicted RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 MGST3O14880 152 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 TCAPO15273 167 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 NUPL2O15504 423 aaKnown RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 MBTPS2O43462 519 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 FAM189A1O60320 539 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 PTTG1O95997 202 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 OXTP01178 125 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 IFNA21P01568 189 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 CD74P04233 296 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 HPNP05981 417 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 HCKP08631 526 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 GTF2F2P13984 249 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 CD1DP15813 335 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF17P17021 662 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 TCP1P17987 556 aaKnown RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 ALOX5APP20292 161 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 MAKP20794 623 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 USF1P22415 310 aaPredicted RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 F2RP25116 425 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 CRABP2P29373 138 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 SHMT2P34897 504 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 GPX4P36969 197 aaPredicted RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 IFNGR2P38484 337 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 GLP1RP43220 463 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 KIR2DS4P43632 304 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 GPR6P46095 362 aaPredicted RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 RPS9P46781 194 aaKnown RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 RPL29P47914 159 aaKnown RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 RAB7AP51149 207 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 LIM2P55344 173 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 CLDN12P56749 244 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 PSME3P61289 254 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 SLC35A1P78382 337 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 BTN3A2P78410 334 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 ARG2P78540 354 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF92Q03936 586 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 EDDM3AQ14507 147 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 NECTIN1Q15223 517 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 CNPY1Q3B7I2 92 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 NSUN5P1Q3KNT7 163 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 CEACAM21Q3KPI0 293 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 HIST2H3PS2Q5TEC6 136 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 HECTD2Q5U5R9 776 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 FAM219BQ5XKK7 198 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF57Q68EA5 555 aaPredicted RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 C11orf71Q6IPW1 123 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 TNFAIP8L2Q6P589 184 aaPredicted RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 Q6ZN92 141 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 MRPL55Q7Z7F7 128 aaKnown RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 LACC1Q8IV20 430 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 CCDC71Q8IV32 467 aaPredicted RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 VRK3Q8IV63 474 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 OR6V1Q8N148 313 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 LRRC25Q8N386 305 aaPredicted RBP2.35□□□□□ -2.03
HMGN4-202ENST00000477243 HSD17B11Q8NBQ5 300 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 OR5AP2Q8NGF4 316 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 OR10R2Q8NGX6 335 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 OR6K3Q8NGY3 331 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 COQ8AQ8NI60 647 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 EEF1AKMT1Q8WVE0 214 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 RASL10AQ92737 203 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 ARPC1AQ92747 370 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 FGF11Q92914 225 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 TMEM230Q96A57 120 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 ZBTB9Q96C00 473 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 DDIT4LQ96D03 193 aa2.35□□□□□ -2.03
HMGN4-202ENST00000477243 ZHX1-C8orf76Q96EF9 292 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms