RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 BATFQ16520 125 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 SPRED2Q7Z698 418 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 LRTM2Q8N967 370 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 OR51G1Q8NGK1 321 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 KCNG3Q8TAE7 436 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 P2RX4Q99571 388 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 ST6GALNAC5Q9BVH7 336 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 IL21Q9HBE4 155 aa12.15□□□□□ -0.47
HDAC1-206ENST00000476391 MRPL22Q9NWU5 206 aaKnown RBP12.15□□□□□ -0.47
HDAC1-206ENST00000476391 CSTAP01040 98 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 SQSTM1Q13501 440 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 MLF2Q15773 248 aaPredicted RBP12.14□□□□□ -0.47
HDAC1-206ENST00000476391 ATP6V1FQ16864 119 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 TMEM183BQ1AE95 376 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 TEX43Q6ZNM6 134 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 MARCH3Q86UD3 253 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 COX14Q96I36 57 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 MS4A10Q96PG2 267 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 ALKBH3Q96Q83 286 aaPredicted RBP12.14□□□□□ -0.47
HDAC1-206ENST00000476391 TBL1XR1Q9BZK7 514 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 RBKSQ9H477 322 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 DECR2Q9NUI1 292 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 HCSTQ9UBK5 93 aa12.14□□□□□ -0.47
HDAC1-206ENST00000476391 CCL25O15444 150 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 CIDEAO60543 219 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 MPIG6BO95866 241 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 CEACAM1P13688 526 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 CMPK1P30085 196 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 CEACAM8P31997 349 aaPredicted RBP12.13□□□□□ -0.47
HDAC1-206ENST00000476391 ZNF93P35789 620 aaPredicted RBP12.13□□□□□ -0.47
HDAC1-206ENST00000476391 CNN1P51911 297 aaKnown RBP12.13□□□□□ -0.47
HDAC1-206ENST00000476391 GNB2P62879 340 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 MGAT2Q10469 447 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 RUNX2Q13950 521 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 NUP54Q7Z3B4 507 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 CENPVQ7Z7K6 275 aaPredicted RBP12.13□□□□□ -0.47
HDAC1-206ENST00000476391 GCNT2Q8N0V5 402 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 OR2C3Q8N628 320 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 OIT3Q8WWZ8 545 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 TMEM37Q8WXS4 190 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 CTHRC1Q96CG8 243 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 TECTBQ96PL2 329 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 OR5B12Q96R08 314 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 Q9N2K0 584 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 B3GALT2O43825 422 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 IGKV1D-16P01601 117 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 TFPI2P48307 235 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 ZNF41P51814 821 aaPredicted RBP12.13□□□□□ -0.47
HDAC1-206ENST00000476391 ARL6IP1Q15041 203 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 OTPQ5XKR4 325 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 P4HA3Q7Z4N8 544 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 VN1R4Q7Z5H5 301 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 ATG4DQ86TL0 474 aaPredicted RBP12.13□□□□□ -0.47
HDAC1-206ENST00000476391 CMTM1Q8IZ96 169 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 NT5CQ8TCD5 201 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 ARHGAP5-AS1Q96IT6 56 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 TMEM59Q9BXS4 323 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 CALHM2Q9HA72 323 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 FUT9Q9Y231 359 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 COL4A2P08572 1712 aa12.13□□□□□ -0.47
HDAC1-206ENST00000476391 MAP1LC3B2A6NCE7 125 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 SCDO00767 359 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 CD55P08174 381 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 DBHP09172 617 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 CT62P0C5K7 136 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 BCL2P10415 239 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 GZMHP20718 246 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 WDR25Q64LD2 544 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-206ENST00000476391 WBP2NLQ6ICG8 309 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 TIPARPQ7Z3E1 657 aaKnown RBP12.12□□□□□ -0.47
HDAC1-206ENST00000476391 ZNF440Q8IYI8 595 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 CISD2Q8N5K1 135 aaKnown RBP12.12□□□□□ -0.47
HDAC1-206ENST00000476391 OR5D14Q8NGL3 314 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 SPPL3Q8TCT6 385 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 CYB5D2Q8WUJ1 264 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 DNAJA3Q96EY1 480 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 SDSLQ96GA7 329 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 MAP1LC3BQ9GZQ8 125 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 RFNGQ9Y644 331 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 TMEM238LA0A1B0GVL6 79 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 P2RY10O00398 339 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 BGLAPP02818 100 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 TYMSP04818 313 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 TUBG1P23258 451 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 WNT5AP41221 380 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 TMEM187Q14656 261 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 TMEM215Q68D42 235 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 CLEC2AQ6UVW9 174 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 GLIPR1L1Q6UWM5 242 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 C16orf82Q7Z2V1 217 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 TMEM25Q86YD3 366 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 H1FOOQ8IZA3 346 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-206ENST00000476391 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 GNG13Q9P2W3 67 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 ALPK2Q86TB3 2170 aa12.12□□□□□ -0.47
HDAC1-206ENST00000476391 TRAV39A0A0B4J263 110 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 FAM221AA4D161 298 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 PRSS37A4D1T9 235 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 SERINC4A6NH21 518 aa12.11□□□□□ -0.47
HDAC1-206ENST00000476391 RRP8O43159 456 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms