RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 OMGP23515 440 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 GJA4P35212 333 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 PIGPP57054 158 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 ARHGEF39Q8N4T4 335 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 MMABQ96EY8 250 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-207ENST00000470763 SHDQ96IW2 340 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 CRYM-AS1A6NIL9 109 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 NPIPA5E9PKD4 350 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 EREGO14944 169 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 JMJD7P0C870 316 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 APLNRP35414 380 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 NFATC4Q14934 902 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 SPSB3Q6PJ21 355 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 M1APQ8TC57 530 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 C11orf40Q8WZ69 217 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 DUSP15Q9H1R2 295 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-207ENST00000470763 ELL3Q9HB65 397 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-207ENST00000470763 AK3Q9UIJ7 227 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 FOXD3Q9UJU5 478 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-207ENST00000470763 PADI1Q9ULC6 663 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 NPIPA1Q9UND3 350 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 TP53TG5Q9Y2B4 290 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 ASCC3Q8N3C0 2202 aaKnown RBP12.07□□□□□ -0.48
NPHP4-207ENST00000470763 MED12Q93074 2177 aa12.07□□□□□ -0.48
NPHP4-207ENST00000470763 DMDP11532 3685 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 POU3F1Q03052 451 aaPredicted RBP12.06□□□□□ -0.48
NPHP4-207ENST00000470763 ZNF664Q8N3J9 261 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 FAM210BQ96KR6 192 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 NIPSNAP3BQ9BS92 247 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 VN1R1Q9GZP7 353 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 GPR84Q9NQS5 396 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 ZNF319Q9P2F9 582 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 MCTS1Q9ULC4 181 aaKnown RBP12.06□□□□□ -0.48
NPHP4-207ENST00000470763 B3GALT1Q9Y5Z6 326 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 A8MWP6 167 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 FXYD4P59646 89 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 IGLV3-21P80748 117 aaPredicted RBP12.06□□□□□ -0.48
NPHP4-207ENST00000470763 FBXW12Q6X9E4 464 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 NUP54Q7Z3B4 507 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 C6orf201Q7Z4U5 140 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 OOSP2Q86WS3 158 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 ZNF248Q8NDW4 579 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 PECRQ9BY49 303 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 MRPL37Q9BZE1 423 aaKnown RBP12.06□□□□□ -0.48
NPHP4-207ENST00000470763 LIME1Q9H400 295 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 WSB1Q9Y6I7 421 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 A0A087WWC5 75 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 ZNF705GA8MUZ8 300 aaPredicted RBP12.06□□□□□ -0.48
NPHP4-207ENST00000470763 AHSA1O95433 338 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 COX5BP10606 129 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 ATP6V0CP27449 155 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 SLC6A8P48029 635 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 GLIPR1P48060 266 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 SLC37A1P57057 533 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 PHLDA2Q53GA4 152 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 TMEM31Q5JXX7 168 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 OGFOD3Q6PK18 319 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 CPEB2Q7Z5Q1 589 aaKnown RBP12.06□□□□□ -0.48
NPHP4-207ENST00000470763 TVP23CQ96ET8 276 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 NUDT22Q9BRQ3 303 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 FAM86C1Q9NVL1 165 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 CYP8B1Q9UNU6 501 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 POLR1DQ9Y2S0 133 aa12.06□□□□□ -0.48
NPHP4-207ENST00000470763 C9J4A7 227 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 ADAM10O14672 748 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 PLRG1O43660 514 aaKnown RBP12.05□□□□□ -0.48
NPHP4-207ENST00000470763 SCAF4O95104 1147 aaKnown RBP12.05□□□□□ -0.48
NPHP4-207ENST00000470763 IL12BP29460 328 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 NOVA1P51513 510 aaKnown RBP12.05□□□□□ -0.48
NPHP4-207ENST00000470763 PRTGQ2VWP7 1150 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 ZNF542PQ5EBM4 170 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 DEGS2Q6QHC5 323 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 C5orf24Q7Z6I8 188 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 TBL1XR1Q9BZK7 514 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 FAM24AA6NFZ4 105 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 FTCDNL1E5RQL4 147 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 FUT3P21217 361 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 GABRR1P24046 479 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 NUTF2P61970 127 aaKnown RBP12.05□□□□□ -0.48
NPHP4-207ENST00000470763 ICAM4Q14773 271 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 ZNF776Q68DI1 518 aaPredicted RBP12.05□□□□□ -0.48
NPHP4-207ENST00000470763 DNM1P34Q6PK57 102 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 OR5L1Q8NGL2 311 aa12.05□□□□□ -0.48
NPHP4-207ENST00000470763 IGKV1-9A0A0C4DH69 117 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 A0A1B0GW64 132 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 SLC33A1O00400 549 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 SOX15O60248 233 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 NPIPB7O75200 414 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 CTSDP07339 412 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 TMEM225BP0DP42 221 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 GZMBP10144 247 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 NR2C1P13056 603 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 PGCP20142 388 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 SUMF1Q8NBK3 374 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 OR8B12Q8NGG6 310 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 PTPMT1Q8WUK0 201 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 ASB10Q8WXI3 467 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 NXT1Q9UKK6 140 aaKnown RBP12.04□□□□□ -0.48
NPHP4-207ENST00000470763 A0A1B0GWJ7 208 aa12.04□□□□□ -0.48
NPHP4-207ENST00000470763 MS4A18H0YCH9 400 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms