RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 R4GMQ9 66 aa17.08■□□□□ 0.32
COL9A3-207ENST00000467819 V9GYS6 101 aa17.08■□□□□ 0.32
COL9A3-207ENST00000467819 TCRBV3S1A0A5B6 114 aa17.07■□□□□ 0.32
COL9A3-207ENST00000467819 MEX3AA1L020 520 aaKnown RBP17.07■□□□□ 0.32
COL9A3-207ENST00000467819 DLGAP1O14490 977 aa17.07■□□□□ 0.32
COL9A3-207ENST00000467819 NOS1APO75052 506 aaPredicted RBP17.07■□□□□ 0.32
COL9A3-207ENST00000467819 TK1P04183 234 aa17.07■□□□□ 0.32
COL9A3-207ENST00000467819 FAHD1Q6P587 224 aa17.07■□□□□ 0.32
COL9A3-207ENST00000467819 ANGPTL5Q86XS5 388 aa17.07■□□□□ 0.32
COL9A3-207ENST00000467819 ELMOD2Q8IZ81 293 aa17.07■□□□□ 0.32
COL9A3-207ENST00000467819 OR14K1Q8NGZ2 314 aa17.07■□□□□ 0.32
COL9A3-207ENST00000467819 TRMT10AQ8TBZ6 339 aaKnown RBP17.07■□□□□ 0.32
COL9A3-207ENST00000467819 PIFOQ8TCI5 191 aa17.07■□□□□ 0.32
COL9A3-207ENST00000467819 CFHR4Q92496 578 aa17.07■□□□□ 0.32
COL9A3-207ENST00000467819 PRRG3Q9BZD7 231 aa17.07■□□□□ 0.32
COL9A3-207ENST00000467819 NOTCH3Q9UM47 2321 aa17.07■□□□□ 0.32
COL9A3-207ENST00000467819 A0A1B0GTI1 187 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 ZNF670-ZNF695F2Z2N8 137 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 GYG2O15488 501 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 OPN1MWP04001 364 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 OPN1MW2P0DN77 364 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 OPN1MW3P0DN78 364 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 ACTR3P61158 418 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 BEAN1Q3B7T3 259 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 LIAT1Q6ZQX7 453 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 CALHM1Q8IU99 346 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 LYG1Q8N1E2 194 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 TCEANCQ8N8B7 351 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 ASCC1Q8N9N2 400 aaKnown RBP17.06■□□□□ 0.32
COL9A3-207ENST00000467819 NRBF2Q96F24 287 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 ADGRL4Q9HBW9 690 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 HES4Q9HCC6 221 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 H2AFY2Q9P0M6 372 aaPredicted RBP17.06■□□□□ 0.32
COL9A3-207ENST00000467819 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.06■□□□□ 0.32
COL9A3-207ENST00000467819 SLC22A13Q9Y226 551 aa17.06■□□□□ 0.32
COL9A3-207ENST00000467819 MEGF11A6BM72 1044 aa17.05■□□□□ 0.32
COL9A3-207ENST00000467819 H3BSH0 61 aa17.05■□□□□ 0.32
COL9A3-207ENST00000467819 MITFO75030 526 aaPredicted RBP17.05■□□□□ 0.32
COL9A3-207ENST00000467819 MPZP25189 248 aa17.05■□□□□ 0.32
COL9A3-207ENST00000467819 RAB13P51153 203 aa17.05■□□□□ 0.32
COL9A3-207ENST00000467819 COL10A1Q03692 680 aa17.05■□□□□ 0.32
COL9A3-207ENST00000467819 HABP2Q14520 560 aaPredicted RBP17.05■□□□□ 0.32
COL9A3-207ENST00000467819 ODF4Q2M2E3 257 aa17.05■□□□□ 0.32
COL9A3-207ENST00000467819 DNAL1Q4LDG9 190 aa17.05■□□□□ 0.32
COL9A3-207ENST00000467819 DYNAPQ8N1N2 210 aa17.05■□□□□ 0.32
COL9A3-207ENST00000467819 MRM2Q9UI43 246 aaKnown RBP17.05■□□□□ 0.32
COL9A3-207ENST00000467819 POMPQ9Y244 141 aa17.05■□□□□ 0.32
COL9A3-207ENST00000467819 SNX5Q9Y5X3 404 aa17.05■□□□□ 0.32
COL9A3-207ENST00000467819 FAM230AA0A1W2PPH8 454 aa17.04■□□□□ 0.32
COL9A3-207ENST00000467819 RPP14O95059 124 aaKnown RBP17.04■□□□□ 0.32
COL9A3-207ENST00000467819 ARG1P05089 322 aa17.04■□□□□ 0.32
COL9A3-207ENST00000467819 DLX6P56179 175 aa17.04■□□□□ 0.32
COL9A3-207ENST00000467819 FAM189A2Q15884 450 aa17.04■□□□□ 0.32
COL9A3-207ENST00000467819 AADACL4Q5VUY2 407 aa17.04■□□□□ 0.32
COL9A3-207ENST00000467819 NXNL2Q5VZ03 156 aa17.04■□□□□ 0.32
COL9A3-207ENST00000467819 MNTQ99583 582 aa17.04■□□□□ 0.32
COL9A3-207ENST00000467819 TBX5Q99593 518 aa17.04■□□□□ 0.32
COL9A3-207ENST00000467819 ZNF702PQ9H963 129 aa17.04■□□□□ 0.32
COL9A3-207ENST00000467819 KRT84Q9NSB2 600 aa17.04■□□□□ 0.32
COL9A3-207ENST00000467819 CLN6Q9NWW5 311 aa17.04■□□□□ 0.32
COL9A3-207ENST00000467819 FAM90A8PA6NJQ4 464 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 C17orf98A8MV24 154 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 K7N7A8 449 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 INMTO95050 263 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 PRB2P02812 416 aaPredicted RBP17.03■□□□□ 0.32
COL9A3-207ENST00000467819 EPHA2P29317 976 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 EDDM3BP56851 147 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 ERVK11-1P61568 191 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 IL24Q13007 206 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 NSUN5P1Q3KNT7 163 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 SLX4IPQ5VYV7 408 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 SSX6Q7RTT6 188 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 TMEM219Q86XT9 240 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 YIPF7Q8N8F6 280 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 TMEM163Q8TC26 289 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 IL4I1Q96RQ9 567 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 PKIBQ9C010 78 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 PLEKHA1Q9HB21 404 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 ABCB10Q9NRK6 738 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 SLC7A11Q9UPY5 501 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 TCF19Q9Y242 345 aa17.03■□□□□ 0.32
COL9A3-207ENST00000467819 DHRS7CA6NNS2 312 aa17.02■□□□□ 0.32
COL9A3-207ENST00000467819 VGLL3A8MV65 326 aa17.02■□□□□ 0.32
COL9A3-207ENST00000467819 SSX2Q16385 188 aa17.02■□□□□ 0.32
COL9A3-207ENST00000467819 SAMD5Q5TGI4 173 aa17.02■□□□□ 0.32
COL9A3-207ENST00000467819 CCBE1Q6UXH8 406 aaPredicted RBP17.02■□□□□ 0.32
COL9A3-207ENST00000467819 Q6ZSR3 168 aa17.02■□□□□ 0.32
COL9A3-207ENST00000467819 GDPD3Q7L5L3 318 aa17.02■□□□□ 0.32
COL9A3-207ENST00000467819 DTX3Q8N9I9 347 aa17.02■□□□□ 0.32
COL9A3-207ENST00000467819 OR13D1Q8NGV5 346 aa17.02■□□□□ 0.32
COL9A3-207ENST00000467819 UTP4Q969X6 686 aaKnown RBP17.02■□□□□ 0.32
COL9A3-207ENST00000467819 SLAMF9Q96A28 289 aa17.02■□□□□ 0.32
COL9A3-207ENST00000467819 FOXRED1Q96CU9 486 aaPredicted RBP17.02■□□□□ 0.32
COL9A3-207ENST00000467819 CADM1Q9BY67 442 aaKnown RBP17.02■□□□□ 0.32
COL9A3-207ENST00000467819 TBL2Q9Y4P3 447 aaKnown RBP17.02■□□□□ 0.32
COL9A3-207ENST00000467819 ZAR1LA6NP61 321 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 ODF3BA8MYP8 253 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 F8VVB4 439 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 F8VWA3 439 aa17.01■□□□□ 0.31
COL9A3-207ENST00000467819 FBXO24O75426 580 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms