RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 RAB38P57729 211 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 DEFA1P59665 94 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 DEFA3P59666 94 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 ACTBP60709 375 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 NUTF2P61970 127 aaKnown RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 BTG1P62324 171 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 TBPL1P62380 186 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 ACTA2P62736 377 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 ACTG1P63261 375 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 ACTG2P63267 376 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 ACTC1P68032 377 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 ACTA1P68133 377 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 VLDLRP98155 873 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 SCN1BQ07699 218 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 GANABQ14697 944 aaKnown RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 NRF1Q16656 503 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 GUK1Q16774 197 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 TMEM249Q2WGJ8 235 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 TRMT5Q32P41 509 aaKnown RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZNF791Q3KP31 576 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 AKIRIN2Q53H80 203 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 ACSBG2Q5FVE4 666 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 KHDRBS2Q5VWX1 349 aaKnown RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 MEDAGQ5VYS4 303 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 CARD17Q5XLA6 110 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 LEMD1Q68G75 181 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 NPSR1Q6W5P4 371 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 RBPMS2Q6ZRY4 209 aaKnown RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 COMMD7Q86VX2 200 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 MEX3DQ86XN8 651 aaKnown RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 CENPLQ8N0S6 344 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZFP82Q8N141 532 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 CA13Q8N1Q1 262 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 COMMD1Q8N668 190 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR2D3Q8NGH3 330 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR9A2Q8NGT5 310 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 PHYHIPQ92561 330 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 C11orf52Q96A22 123 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 L3HYPDHQ96EM0 354 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 CYYR1Q96J86 154 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 TMED9Q9BVK6 235 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 UGT2B28Q9BY64 529 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR8D2Q9GZM6 311 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 ROGDIQ9GZN7 287 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 PROK2Q9HC23 129 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 TMEM138Q9NPI0 162 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 ACOXLQ9NUZ1 547 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 MRPL22Q9NWU5 206 aaKnown RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 PDP1Q9P0J1 537 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 SLC2A6Q9UGQ3 507 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 SLC6A5Q9Y345 797 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 STRAPQ9Y3F4 350 aaKnown RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 CCL27Q9Y4X3 112 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 AUP1Q9Y679 476 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 MEGF8Q7Z7M0 2845 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 MGAM2Q2M2H8 2515 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 HELTA6NFD8 242 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 A6NIZ1 184 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 RPL37AP8A6NKH3 93 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SERPINE3A8MV23 424 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 BTNL10A8MVZ5 291 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 KRBOX1C9JBD0 128 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SULT1C2O00338 296 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SLC33A1O00400 549 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 CCSO14618 274 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ARPC5O15511 151 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 CFLARO15519 480 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZNF780AO75290 641 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TNFSF13O75888 250 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 C8GP07360 202 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ERCC1P07992 297 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TRAPPC2P0DI81 140 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TRAPPC2BP0DI82 140 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 THRBP10828 461 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SLC25A16P16260 332 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SPI1P17947 270 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TUBG1P23258 451 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ERP29P30040 261 aaKnown RBP3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 RPL22P35268 128 aaKnown RBP3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ACVR1BP36896 505 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 HPCAL1P37235 193 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 FDFT1P37268 417 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 DDOSTP39656 456 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 MAP3K8P41279 467 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 GSK3BP49841 420 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 RAB8AP61006 207 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 RAB2AP61019 212 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ARF6P62330 175 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 BTN3A2P78410 334 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 HSF2Q03933 536 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 LOXL1Q08397 574 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SNTB2Q13425 540 aaKnown RBP3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 APOFQ13790 326 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 KCNJ11Q14654 390 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 ARL6IP1Q15041 203 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 SLC9A3R2Q15599 337 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 TRIP10Q15642 601 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 PDK4Q16654 411 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 NDUFAF6Q330K2 333 aa3.57□□□□□ -1.84
HMGB3P5-201ENST00000428894 CDNFQ49AH0 187 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms