RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 S100PP25815 95 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 CEACAM6P40199 344 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 CSNK1A1P48729 337 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 RGS6P49758 472 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 RAB13P51153 203 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 CRYBA4P53673 196 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 VSX2P58304 361 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 HERVK_113P61574 105 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 PPP1CBP62140 327 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 CCL7P80098 99 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 NDPQ00604 133 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 PSG7Q13046 419 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 POU6F1Q14863 301 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 RGNQ15493 299 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 KCNJ8Q15842 424 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 BSXQ3C1V8 233 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 PIGGQ5H8A4 983 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 TMEM25Q86YD3 366 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 CALHM1Q8IU99 346 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 RIBC1Q8N443 379 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF561Q8N587 486 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 LINC01555Q8NAE3 123 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 OR51G1Q8NGK1 321 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 OR10G4Q8NGN3 311 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 RNF133Q8WVZ7 376 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 RASSF5Q8WWW0 418 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 CDS1Q92903 461 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 HAUS1Q96CS2 278 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 TCEAL4Q96EI5 215 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 RNF170Q96K19 258 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 BTN2A3PQ96KV6 586 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 TMEM56Q96MV1 263 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 SCGB3A2Q96PL1 93 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF2Q9BSG1 426 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 SLC19A3Q9BZV2 496 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 PARP12Q9H0J9 701 aaKnown RBP3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 PLEKHJ1Q9NW61 149 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 MTFP1Q9UDX5 166 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 GUCA1BQ9UMX6 200 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 TMEM56-RWDD3S4R434 201 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 EEA1Q15075 1411 aa3.32□□□□□ -1.88
HMGB1P13-201ENST00000406019 TAF1LQ8IZX4 1826 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 ERICH3Q5RHP9 1530 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF518AQ6AHZ1 1483 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 WRNQ14191 1432 aaPredicted RBP eCLIP3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 A0A0B4J2E0 115 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 IGHV3-64DA0A0J9YX35 117 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 PQLC2LA1A4F0 135 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 ANKRD63C9JTQ0 380 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 SS18L1O75177 396 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 CTDNEP1O95476 244 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 FABP3P05413 133 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 OR8U9P0C7N5 309 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 HSPD1P10809 573 aaKnown RBP3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 KCNE1P15382 129 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 CD36P16671 472 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF17P17021 662 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 NELFEP18615 380 aaKnown RBP3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 HTR2CP28335 458 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 PMELP40967 661 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 RBM34P42696 430 aaKnown RBP3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 CXCL5P42830 114 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 PPICP45877 212 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 EIF2B2P49770 351 aaKnown RBP3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 RAB7AP51149 207 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 UBE2E1P51965 193 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 OR2B8PP59922 312 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 UBE2KP61086 200 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 IFITM2Q01629 132 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 AESQ08117 197 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 KIR2DS1Q14954 304 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF79Q15937 498 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 ATP6V1FQ16864 119 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 SYPL2Q5VXT5 272 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 RPL13AP3Q6NVV1 102 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 DNAJC24Q6P3W2 148 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 ARL9Q6T311 187 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 CYHR1Q6ZMK1 362 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 C6orf120Q7Z4R8 191 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 C11orf53Q8IXP5 236 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 WDR31Q8NA23 367 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 OR4K2Q8NGD2 314 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 OR6K6Q8NGW6 343 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 OR8U1Q8NH10 309 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 RGP1Q92546 391 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 PPWD1Q96BP3 646 aaKnown RBP3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 PDXPQ96GD0 296 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 CENPNQ96H22 339 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 UBE2E2Q96LR5 201 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 RBBP8Q99708 897 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF426Q9BUY5 554 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 SLC25A2Q9BXI2 301 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 ULBP2Q9BZM5 246 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 CDC42EP4Q9H3Q1 356 aaKnown RBP3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 REEP1Q9H902 201 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 NANOGQ9H9S0 305 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 ANKHQ9HCJ1 492 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 C6orf50Q9HD87 102 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 ISYNA1Q9NPH2 558 aa3.31□□□□□ -1.88
HMGB1P13-201ENST00000406019 VAPAQ9P0L0 249 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms