RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 F2RP25116 425 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 PRRX1P54821 245 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 C21orf58P58505 322 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 HMGCLL1Q8TB92 370 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 PIK3IP1Q96FE7 263 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 TRIB1Q96RU8 372 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 IGHV3-15A0A0B4J1V0 119 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 YIF1AO95070 293 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 MPC2O95563 127 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 DUS4LO95620 317 aaKnown RBP9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 CYC1P08574 325 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 ABCD3P28288 659 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 FHITP49789 147 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 DUSP2Q05923 314 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 CEACAM16Q2WEN9 425 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 TMEM196Q5HYL7 178 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 DHRS7BQ6IAN0 325 aaPredicted RBP9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 ZCCHC14Q8WYQ9 949 aaKnown RBP9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 ROBO4Q8WZ75 1007 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 RAB40CQ96S21 281 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 CITED1Q99966 193 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 DEFB127Q9H1M4 99 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 PROCRQ9UNN8 238 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 DDX60LQ5H9U9 1706 aaKnown RBP9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 UBE2L5PA0A1B0GUS4 154 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 C9orf170A2RU37 121 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 TNFSF11O14788 317 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 MYOGP15173 224 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 SLC6A1P30531 599 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 RPS16P62249 146 aaKnown RBP9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 PRSS54Q6PEW0 395 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 DEFB108BQ8NET1 73 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 ADAMTS17Q8TE56 1095 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 ST6GAL2Q96JF0 529 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 FOXB1Q99853 325 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 LPAR5Q9H1C0 372 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 SLC35B3Q9H1N7 401 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 PAM16Q9Y3D7 125 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 LIPGQ9Y5X9 500 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 A0A1W2PN81 502 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 ANKRD20A5PA0PJZ0 165 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 GPR37O15354 613 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 CHRNA7P36544 502 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 CDC34P49427 236 aaPredicted RBP9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 MVDP53602 400 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 PPIAP62937 165 aaKnown RBP9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 TMEM240Q5SV17 173 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 OR5AU1Q8NGC0 362 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 GNB4Q9HAV0 340 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 RASL12Q9NYN1 266 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 SHROOM3Q8TF72 1996 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 COX7A2P2O60397 106 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 EPPINO95925 133 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 IL2RAP01589 272 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 HEXAP06865 529 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 FAM157BP0CG42 384 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 DSCR4P56555 118 aaPredicted RBP9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 HTRA3P83110 453 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 GABRA6Q16445 453 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 Q8IYB0 196 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 EIF4E3Q8N5X7 224 aaKnown RBP9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 ARHGAP5-AS1Q96IT6 56 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 UQCC1Q9NVA1 299 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 DNAJB12Q9NXW2 375 aaKnown RBP9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 IL19Q9UHD0 177 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 IGHV3-64DA0A0J9YX35 117 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 TMEM30CPA0ZSE6 113 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 OOEPA6NGQ2 149 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 MBTPS2O43462 519 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 DDTP30046 118 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 CDAP32320 146 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 CCR2P41597 374 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 SPCS3P61009 180 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 RPL11P62913 178 aaKnown RBP9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 KISS1Q15726 138 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 ZNF343Q6P1L6 599 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 GPR137Q96N19 417 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 OR4C12Q96R67 309 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 MAP1LC3CQ9BXW4 147 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 OPN3Q9H1Y3 402 aaPredicted RBP9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 LRP5O75197 1615 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 CTDSPLO15194 276 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 CDS2O95674 445 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 GPANK1O95872 356 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 AREGP15514 252 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 INSL4Q14641 139 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 RPEL1Q2QD12 228 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 SP6Q3SY56 376 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 ABHD1Q96SE0 405 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 Q9N2K0 584 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 OCIAD1Q9NX40 245 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 ALS2Q96Q42 1657 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 LINC01387J3KSC0 135 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 GYPAP02724 150 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 GLULP15104 373 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 GPR3P46089 330 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 TAS2R60P59551 318 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 GNB1P62873 340 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 RAB32Q13637 225 aa9.16□□□□□ -0.94
LIMCH1-203ENST00000396595 IL13RA2Q14627 380 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms