RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 PIN1P1O15428 100 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 ADAM20O43506 726 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 SPRY1O43609 319 aaPredicted RBP16.03■□□□□ 0.16
HOXA9-202ENST00000396345 INMTO95050 263 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 NXPH2O95156 264 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 TGFAP01135 160 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 ALDOBP05062 364 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 GABRA5P31644 462 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 SSX1Q16384 188 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 CRIP3Q6Q6R5 217 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 ACP7Q6ZNF0 438 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 NLRC3Q7RTR2 1065 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 BATF2Q8N1L9 274 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 TSPAN14Q8NG11 270 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 OR5T2Q8NGG2 359 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 OR8B3Q8NGG8 313 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 OR52N4Q8NGI2 321 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 OR5D18Q8NGL1 313 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 OR51F2Q8NH61 342 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 CEP19Q96LK0 163 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 OR8B2Q96RD0 313 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 GPER1Q99527 375 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 LPAR2Q9HBW0 351 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 SF3B6Q9Y3B4 125 aaKnown RBP16.03■□□□□ 0.16
HOXA9-202ENST00000396345 MTORP42345 2549 aa16.02■□□□□ 0.16
HOXA9-202ENST00000396345 A0A087WXM4 84 aa16.02■□□□□ 0.16
HOXA9-202ENST00000396345 TRAPPC2LH3BP13 241 aa16.02■□□□□ 0.16
HOXA9-202ENST00000396345 SC5DO75845 299 aa16.02■□□□□ 0.16
HOXA9-202ENST00000396345 ERVK11-1P61568 191 aa16.02■□□□□ 0.16
HOXA9-202ENST00000396345 SEC61A1P61619 476 aaKnown RBP16.02■□□□□ 0.16
HOXA9-202ENST00000396345 SMIM21Q3B7S5 101 aa16.02■□□□□ 0.16
HOXA9-202ENST00000396345 ESCO2Q56NI9 601 aa16.02■□□□□ 0.16
HOXA9-202ENST00000396345 DDI2Q5TDH0 399 aa16.02■□□□□ 0.16
HOXA9-202ENST00000396345 STUMQ69YW2 141 aa16.02■□□□□ 0.16
HOXA9-202ENST00000396345 CCL13Q99616 98 aa16.02■□□□□ 0.16
HOXA9-202ENST00000396345 ZNF696Q9H7X3 374 aa16.02■□□□□ 0.16
HOXA9-202ENST00000396345 OR2AT4A6NND4 320 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 ANGPTL7O43827 346 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 RGS9O75916 674 aaPredicted RBP16.01■□□□□ 0.15
HOXA9-202ENST00000396345 MAS1P04201 325 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 TMEM225BP0DP42 221 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 PITPNBP48739 271 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 NEDD8Q15843 81 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 FAM27D1Q5T7N8 215 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 TMEM91Q6ZNR0 172 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 Q71RC1 249 aaPredicted RBP16.01■□□□□ 0.15
HOXA9-202ENST00000396345 ANGPTL6Q8NI99 470 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 HES4Q9HCC6 221 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 YAE1D1Q9NRH1 226 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 NDUFB11Q9NX14 153 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 KAAG1Q9UBP8 84 aa16.01■□□□□ 0.15
HOXA9-202ENST00000396345 MALRD1Q5VYJ5 2156 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 F8VVB4 439 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 F8VWA3 439 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 CCRL2O00421 344 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 TMPRSS2O15393 492 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 FOXH1O75593 365 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 MSMBP08118 114 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 UCHL1P09936 223 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 PSG2P11465 335 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 BCL3P20749 454 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 ZNF93P35789 620 aaPredicted RBP16■□□□□ 0.15
HOXA9-202ENST00000396345 GABRA2P47869 451 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 ZP1P60852 638 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 GNB2P62879 340 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 LCN2P80188 198 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 FABP5Q01469 135 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 HSD17B12Q53GQ0 312 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 ATPAF1Q5TC12 328 aaPredicted RBP16■□□□□ 0.15
HOXA9-202ENST00000396345 FAM166AQ6J272 317 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 SLC36A1Q7Z2H8 476 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 Q8IYB0 196 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 SAXO1Q8IYX7 474 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 ZSCAN4Q8NAM6 433 aaPredicted RBP16■□□□□ 0.15
HOXA9-202ENST00000396345 TNFAIP8L1Q8WVP5 186 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 PHYHIPQ92561 330 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 NR1H4Q96RI1 486 aaPredicted RBP16■□□□□ 0.15
HOXA9-202ENST00000396345 SSBP3Q9BWW4 388 aaPredicted RBP16■□□□□ 0.15
HOXA9-202ENST00000396345 DNTTIP1Q9H147 329 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 SMURF1Q9HCE7 757 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 TCF7L1Q9HCS4 588 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 CTSZQ9UBR2 303 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 CLN8Q9UBY8 286 aa16■□□□□ 0.15
HOXA9-202ENST00000396345 IGKV1D-17A0A075B6S4 117 aa15.99■□□□□ 0.15
HOXA9-202ENST00000396345 IGKV1-12A0A0C4DH73 117 aa15.99■□□□□ 0.15
HOXA9-202ENST00000396345 MAGEA13PA6NCF6 341 aa15.99■□□□□ 0.15
HOXA9-202ENST00000396345 NKX6-3A6NJ46 265 aa15.99■□□□□ 0.15
HOXA9-202ENST00000396345 GABRPO00591 440 aa15.99■□□□□ 0.15
HOXA9-202ENST00000396345 PHF1O43189 567 aaPredicted RBP15.99■□□□□ 0.15
HOXA9-202ENST00000396345 IGKV1D-12P01611 117 aa15.99■□□□□ 0.15
HOXA9-202ENST00000396345 TFF1P04155 84 aa15.99■□□□□ 0.15
HOXA9-202ENST00000396345 ZFP36P26651 326 aaKnown RBP15.99■□□□□ 0.15
HOXA9-202ENST00000396345 NPBWR2P48146 333 aa15.99■□□□□ 0.15
HOXA9-202ENST00000396345 GP2P55259 537 aaKnown RBP15.99■□□□□ 0.15
HOXA9-202ENST00000396345 SYT6Q5T7P8 510 aaPredicted RBP15.99■□□□□ 0.15
HOXA9-202ENST00000396345 ZNF841Q6ZN19 808 aa15.99■□□□□ 0.15
HOXA9-202ENST00000396345 GLCCI1Q86VQ1 547 aa15.99■□□□□ 0.15
HOXA9-202ENST00000396345 EMG1Q92979 244 aaKnown RBP15.99■□□□□ 0.15
HOXA9-202ENST00000396345 NKX3-1Q99801 234 aaPredicted RBP15.99■□□□□ 0.15
HOXA9-202ENST00000396345 PPIL3Q9H2H8 161 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms