RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 NRIP2Q9BQI9 281 aa11.29□□□□□ -0.6
CXCL12-205ENST00000395794 C9orf16Q9BUW7 83 aa11.29□□□□□ -0.6
CXCL12-205ENST00000395794 PKIBQ9C010 78 aa11.29□□□□□ -0.6
CXCL12-205ENST00000395794 ELL3Q9HB65 397 aaPredicted RBP11.29□□□□□ -0.6
CXCL12-205ENST00000395794 OR14J1Q9UGF5 321 aa11.29□□□□□ -0.6
CXCL12-205ENST00000395794 GMPPBQ9Y5P6 360 aa11.29□□□□□ -0.6
CXCL12-205ENST00000395794 A0A1W2PRD5 423 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 A0A1W2PRF3 423 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 A0A1W2PRM7 423 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 MEIOCA2RUB1 952 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 RNASEK-C17orf49H0YIS7 233 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 H3BNX3 289 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 SPRY1O43609 319 aaPredicted RBP11.28□□□□□ -0.6
CXCL12-205ENST00000395794 CYB5AP00167 134 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 KNG1P01042 644 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 IGHV4-59P01825 116 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 OCM2P0CE71 109 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 OCMP0CE72 109 aaPredicted RBP11.28□□□□□ -0.6
CXCL12-205ENST00000395794 MDKP21741 143 aaPredicted RBP11.28□□□□□ -0.6
CXCL12-205ENST00000395794 MPZP25189 248 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 IER3P46695 156 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 UBE2E1P51965 193 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 RPL31P62899 125 aaKnown RBP11.28□□□□□ -0.6
CXCL12-205ENST00000395794 ZNF85Q03923 595 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 ACSM1Q08AH1 577 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 OCLNQ16625 522 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 TMEM244Q5VVB8 128 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 C17orf107Q6ZR85 190 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 PRSS35Q8N3Z0 413 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 CD177Q8N6Q3 437 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 PP6455Q8WZ26 134 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 BORCS8Q96FH0 119 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 Q96MT0 163 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 CHST5Q9GZS9 411 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 SF3B6Q9Y3B4 125 aaKnown RBP11.28□□□□□ -0.6
CXCL12-205ENST00000395794 MMP24Q9Y5R2 645 aa11.28□□□□□ -0.6
CXCL12-205ENST00000395794 LOC107986453A0A1B0GWG9 222 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 SLC16A6O15403 523 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 MPZL2O60487 215 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 NDUFA7O95182 113 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 ZNF20P17024 532 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 ACTA2P62736 377 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 ACTG2P63267 376 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 PRB3Q04118 309 aaPredicted RBP11.27□□□□□ -0.61
CXCL12-205ENST00000395794 KLRD1Q13241 179 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 UBE2V2Q15819 145 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 GDPGP1Q6ZNW5 385 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 CALHM1Q8IU99 346 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 BATF2Q8N1L9 274 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 ACBD7Q8N6N7 88 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 TAF15Q92804 592 aaKnown RBP eCLIP11.27□□□□□ -0.61
CXCL12-205ENST00000395794 CEP19Q96LK0 163 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 FAM234AQ9H0X4 552 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 SLITRK2Q9H156 845 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 C1RLQ9NZP8 487 aa11.27□□□□□ -0.61
CXCL12-205ENST00000395794 J3QLW9 94 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 ANGPTL7O43827 346 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 GPR137BO60478 399 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 TK1P04183 234 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 CHRM2P08172 466 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 HTR1AP08908 422 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 ZNF19P17023 458 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 PRKACBP22694 351 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 SAA4P35542 130 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 CEBPDP49716 269 aaPredicted RBP11.26□□□□□ -0.61
CXCL12-205ENST00000395794 RBP2P50120 134 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 ATP1B3P54709 279 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 DLX1P56177 255 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 ISL1P61371 349 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 ZBTB49Q6ZSB9 765 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 EGFL6Q8IUX8 553 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 Q8IYB0 196 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 RDH10Q8IZV5 341 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 ASCC1Q8N9N2 400 aaKnown RBP11.26□□□□□ -0.61
CXCL12-205ENST00000395794 OR4M1Q8NGD0 313 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 OR2G2Q8NGZ5 317 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 TNFRSF14Q92956 283 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 HEXA-AS1Q9H8Q6 139 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 NEK6Q9HC98 313 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 HES4Q9HCC6 221 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 S100A14Q9HCY8 104 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 C19orf12Q9NSK7 152 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 NBEAL1Q6ZS30 2694 aa11.26□□□□□ -0.61
CXCL12-205ENST00000395794 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 INMTO95050 263 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 FADS2O95864 444 aaKnown RBP11.25□□□□□ -0.61
CXCL12-205ENST00000395794 ISG15P05161 165 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 RPSAP08865 295 aaKnown RBP11.25□□□□□ -0.61
CXCL12-205ENST00000395794 KIR3DL2P43630 455 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 CCR9P51686 369 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 MTCP1P56278 107 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 OR12D2P58182 307 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 ERVK11-1P61568 191 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 MIDNQ504T8 468 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 OLFML2AQ68BL7 652 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 TMEM200BQ69YZ2 307 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 FDX2Q6P4F2 183 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 SLC25A26Q70HW3 274 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 GDPD3Q7L5L3 318 aa11.25□□□□□ -0.61
CXCL12-205ENST00000395794 MKXQ8IYA7 352 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms