RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 MPZP25189 248 aa13.67□□□□□ -0.22
SMN2-201ENST00000380741 C11orf88Q6PI97 169 aa13.67□□□□□ -0.22
SMN2-201ENST00000380741 CALHM1Q8IU99 346 aa13.67□□□□□ -0.22
SMN2-201ENST00000380741 SLC35F2Q8IXU6 374 aa13.67□□□□□ -0.22
SMN2-201ENST00000380741 OR2T6Q8NHC8 308 aa13.67□□□□□ -0.22
SMN2-201ENST00000380741 PIFOQ8TCI5 191 aa13.67□□□□□ -0.22
SMN2-201ENST00000380741 CFHR4Q92496 578 aa13.67□□□□□ -0.22
SMN2-201ENST00000380741 PRRG3Q9BZD7 231 aa13.67□□□□□ -0.22
SMN2-201ENST00000380741 MRM2Q9UI43 246 aaKnown RBP13.67□□□□□ -0.22
SMN2-201ENST00000380741 hCG_1809904A0A1W2PP81 198 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 A0A1W2PPE2 198 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 A0A1W2PR64 198 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 A0A1W2PRV1 198 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 MITFO75030 526 aaPredicted RBP13.66□□□□□ -0.22
SMN2-201ENST00000380741 TK1P04183 234 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 PIPP12273 146 aaPredicted RBP13.66□□□□□ -0.22
SMN2-201ENST00000380741 EPHA2P29317 976 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 DLX6P56179 175 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 LGALS4P56470 323 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 AADACL4Q5VUY2 407 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 NXNL2Q5VZ03 156 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 LIAT1Q6ZQX7 453 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 Q6ZSR3 168 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 LHFPL4Q7Z7J7 247 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 TCEANCQ8N8B7 351 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 TMEM163Q8TC26 289 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 UTP4Q969X6 686 aaKnown RBP13.66□□□□□ -0.22
SMN2-201ENST00000380741 MNTQ99583 582 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 NPFFR1Q9GZQ6 430 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 SNX5Q9Y5X3 404 aa13.66□□□□□ -0.22
SMN2-201ENST00000380741 DHRS7CA6NNS2 312 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 ZNF670-ZNF695F2Z2N8 137 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 G3V4G9 280 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 OPN1MWP04001 364 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 OPN1MW2P0DN77 364 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 OPN1MW3P0DN78 364 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 ACTR3P61158 418 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 ERVK11-1P61568 191 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 EFNB1P98172 346 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 PLA1AQ53H76 456 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 SLX4IPQ5VYV7 408 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 ANGPTL5Q86XS5 388 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 DYNAPQ8N1N2 210 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 TRMT10AQ8TBZ6 339 aaKnown RBP13.65□□□□□ -0.22
SMN2-201ENST00000380741 SLC7A6OSQ96CW6 309 aaPredicted RBP13.65□□□□□ -0.22
SMN2-201ENST00000380741 NKX3-1Q99801 234 aaPredicted RBP13.65□□□□□ -0.22
SMN2-201ENST00000380741 PKIBQ9C010 78 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 KRT84Q9NSB2 600 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 CLN6Q9NWW5 311 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 H2AFY2Q9P0M6 372 aaPredicted RBP13.65□□□□□ -0.22
SMN2-201ENST00000380741 SLC22A13Q9Y226 551 aa13.65□□□□□ -0.22
SMN2-201ENST00000380741 MEX3AA1L020 520 aaKnown RBP13.64□□□□□ -0.23
SMN2-201ENST00000380741 FAM90A8PA6NJQ4 464 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 ZAR1LA6NP61 321 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 C17orf98A8MV24 154 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 VGLL3A8MV65 326 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 K7N7A8 449 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 RPP14O95059 124 aaKnown RBP13.64□□□□□ -0.23
SMN2-201ENST00000380741 VSIG10L2P0DP72 767 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 CCL1P22362 96 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 COL10A1Q03692 680 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 IL24Q13007 206 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 ODF4Q2M2E3 257 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 SSX6Q7RTT6 188 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 ASCC1Q8N9N2 400 aaKnown RBP13.64□□□□□ -0.23
SMN2-201ENST00000380741 IL4I1Q96RQ9 567 aa13.64□□□□□ -0.23
SMN2-201ENST00000380741 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMN2-201ENST00000380741 NOTCH3Q9UM47 2321 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 FAM230AA0A1W2PPH8 454 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 ODF3BA8MYP8 253 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 F8VVB4 439 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 F8VWA3 439 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 H3BSH0 61 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 ZNF737O75373 536 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 DNAJC8O75937 253 aaPredicted RBP13.63□□□□□ -0.23
SMN2-201ENST00000380741 ARG1P05089 322 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 RAB13P51153 203 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 HABP2Q14520 560 aaPredicted RBP13.63□□□□□ -0.23
SMN2-201ENST00000380741 BEAN1Q3B7T3 259 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 C12orf73Q69YU5 71 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 GID4Q8IVV7 300 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 TBX5Q99593 518 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 CADM1Q9BY67 442 aaKnown RBP13.63□□□□□ -0.23
SMN2-201ENST00000380741 ZNF702PQ9H963 129 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 PLEKHA1Q9HB21 404 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 MTCH1Q9NZJ7 389 aa13.63□□□□□ -0.23
SMN2-201ENST00000380741 IGKV1-27A0A075B6S5 117 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 KRT8P05787 483 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 ZNF728P0DKX0 622 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 UBE2V2Q15819 145 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 LDLRAD2Q5SZI1 272 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 SAMD5Q5TGI4 173 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 CCBE1Q6UXH8 406 aaPredicted RBP13.62□□□□□ -0.23
SMN2-201ENST00000380741 CATSPERDQ86XM0 798 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 LYG1Q8N1E2 194 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 YIPF7Q8N8F6 280 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 OR13D1Q8NGV5 346 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 FOXRED1Q96CU9 486 aaPredicted RBP13.62□□□□□ -0.23
SMN2-201ENST00000380741 SERTAD4Q9NUC0 356 aa13.62□□□□□ -0.23
SMN2-201ENST00000380741 SLC7A11Q9UPY5 501 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms