RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 FAM209AQ5JX71 171 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 MZT2AQ6P582 158 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 MKXQ8IYA7 352 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 CELF2-AS1Q8N7Q2 184 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 ZSCAN4Q8NAM6 433 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 ACOT12Q8WYK0 555 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 METTL9Q9H1A3 318 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 MIXL1Q9H2W2 232 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 MMP27Q9H306 513 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 FN3KRPQ9HA64 309 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 RBFOX1Q9NWB1 397 aaKnown RBP11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 PPP1R3CQ9UQK1 317 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 ABCA12Q86UK0 2595 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 APCP25054 2843 aa11.91□□□□□ -0.5
HERPUD1-203ENST00000379792 LYNX1G3V0Z9 82 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 TRAPPC2LH3BP13 241 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 LDLRAD4O15165 306 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 NDUFS7O75251 213 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 MPIG6BO95866 241 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 LYNX1P0DP58 116 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 BMP4P12644 408 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 SNU13P55769 128 aaKnown RBP11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 LAX1Q8IWV1 398 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 PXT1Q8NFP0 134 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 LRRC29Q8WV35 223 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 SEH1LQ96EE3 360 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 IL36RNQ9UBH0 155 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 SPATA2Q9UM82 520 aa11.9□□□□□ -0.5
HERPUD1-203ENST00000379792 ZNF205O95201 554 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 CYB5R3P00387 301 aaPredicted RBP11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 CSTBP04080 98 aaKnown RBP11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 EIF4EP06730 217 aaKnown RBP11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 UBBP0CG47 229 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 TNFRSF1AP19438 455 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 GATA4P43694 442 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 TESK1Q15569 626 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 FAM201AQ5SY85 155 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 C20orf204Q6ZNR8 217 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 BIVMQ86UB2 503 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 SAXO1Q8IYX7 474 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 C19orf18Q8NEA5 215 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 SLC25A38Q96DW6 304 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 CEP19Q96LK0 163 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 RAB1BQ9H0U4 201 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 WDR13Q9H1Z4 485 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 POLDIP2Q9Y2S7 368 aa11.9□□□□□ -0.51
HERPUD1-203ENST00000379792 RAI1Q7Z5J4 1906 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 CHD3Q12873 2000 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 TMEM14DPA8MWL7 114 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 KDM4BO94953 1096 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 PGA5P0DJD9 388 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 MGMTP16455 207 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 EGR1P18146 543 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 ELK1P19419 428 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 DUSP1P28562 367 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 CMTM4Q8IZR5 234 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 KCNG3Q8TAE7 436 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 CCL17Q92583 94 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 CCL19Q99731 98 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 NRIP2Q9BQI9 281 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 SELENOIQ9C0D9 397 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 GHRLQ9UBU3 117 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 ETV7Q9Y603 341 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 DSCAMO60469 2012 aa11.89□□□□□ -0.51
HERPUD1-203ENST00000379792 USF3Q68DE3 2245 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 FAM25AB3EWG3 89 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 FAM25CB3EWG5 89 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 FAM25GB3EWG6 89 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 NXPH2O95156 264 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 PRKACAP17612 351 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 COL8A2P25067 703 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 TNFSF8P32971 234 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 ART1P52961 327 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 ERVK11-1P61568 191 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 PDCD1Q15116 288 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 PIGYQ3MUY2 71 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 POC1AQ8NBT0 407 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 OR6Q1Q8NGQ2 317 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 EMG1Q92979 244 aaKnown RBP11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 NICN1Q9BSH3 213 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 MRI1Q9BV20 369 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 TMEM59Q9BXS4 323 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 ATG5Q9H1Y0 275 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 RHBDL2Q9NX52 303 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 ZNF581Q9P0T4 197 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 RAB22AQ9UL26 194 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 A3GALT2U3KPV4 340 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 FBN2P35556 2912 aa11.88□□□□□ -0.51
HERPUD1-203ENST00000379792 IGHV3OR15-7A0A075B7D8 119 aa11.87□□□□□ -0.51
HERPUD1-203ENST00000379792 IGHV1-69-2A0A0G2JMI3 117 aa11.87□□□□□ -0.51
HERPUD1-203ENST00000379792 H7C417 338 aa11.87□□□□□ -0.51
HERPUD1-203ENST00000379792 OVOL3O00110 214 aa11.87□□□□□ -0.51
HERPUD1-203ENST00000379792 TMEM127O75204 238 aa11.87□□□□□ -0.51
HERPUD1-203ENST00000379792 GTF2F2P13984 249 aa11.87□□□□□ -0.51
HERPUD1-203ENST00000379792 CD80P33681 288 aa11.87□□□□□ -0.51
HERPUD1-203ENST00000379792 DYNC1I2Q13409 638 aaKnown RBP11.87□□□□□ -0.51
HERPUD1-203ENST00000379792 GPR176Q14439 515 aa11.87□□□□□ -0.51
HERPUD1-203ENST00000379792 UBE2NLQ5JXB2 153 aa11.87□□□□□ -0.51
HERPUD1-203ENST00000379792 OR2W3Q7Z3T1 314 aa11.87□□□□□ -0.51
HERPUD1-203ENST00000379792 IZUMO1Q8IYV9 350 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 225.5 ms