RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CPNE2Q96FN4 548 aaPredicted RBP22.03■■□□□ 1.12
C9orf40-201ENST00000376854 LIME1Q9H400 295 aa22.03■■□□□ 1.12
C9orf40-201ENST00000376854 RCC2Q9P258 522 aaKnown RBP22.03■■□□□ 1.12
C9orf40-201ENST00000376854 MLXQ9UH92 298 aa22.03■■□□□ 1.12
C9orf40-201ENST00000376854 MYO7BQ6PIF6 2116 aa22.03■■□□□ 1.12
C9orf40-201ENST00000376854 IGKV1-27A0A075B6S5 117 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 MASP2O00187 686 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 KLF7O75840 302 aaPredicted RBP22.02■■□□□ 1.12
C9orf40-201ENST00000376854 CCL4P13236 92 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 OPRM1P35372 400 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 SULT1A2P50226 295 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 ZNF774Q6NX45 483 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 PRRX2Q99811 253 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 FBXL17Q9UF56 701 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 HSF4Q9ULV5 492 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 LSM5Q9Y4Y9 91 aaKnown RBP22.02■■□□□ 1.12
C9orf40-201ENST00000376854 ZNF850A8MQ14 1090 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 SYNGR3O43761 229 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 FBXO24O75426 580 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 CBR3O75828 277 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 FARS2O95363 451 aaKnown RBP22.02■■□□□ 1.12
C9orf40-201ENST00000376854 FCGR2CP31995 323 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 PRSS12P56730 875 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 HGFACQ04756 655 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 CNN3Q15417 329 aaKnown RBP22.02■■□□□ 1.12
C9orf40-201ENST00000376854 TMEM268Q5VZI3 342 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 CMSS1Q9BQ75 279 aaKnown RBP22.02■■□□□ 1.12
C9orf40-201ENST00000376854 NECAP2Q9NVZ3 263 aa22.02■■□□□ 1.12
C9orf40-201ENST00000376854 PIGPP57054 158 aa22.01■■□□□ 1.11
C9orf40-201ENST00000376854 RPS19BP1Q86WX3 136 aaKnown RBP22.01■■□□□ 1.11
C9orf40-201ENST00000376854 GPR137CQ8N3F9 429 aa22.01■■□□□ 1.11
C9orf40-201ENST00000376854 TOMM40LQ969M1 308 aa22.01■■□□□ 1.11
C9orf40-201ENST00000376854 NTNG2Q96CW9 530 aa22.01■■□□□ 1.11
C9orf40-201ENST00000376854 CDX2Q99626 313 aaPredicted RBP22.01■■□□□ 1.11
C9orf40-201ENST00000376854 TNRC6BQ9UPQ9 1833 aaKnown RBP22.01■■□□□ 1.11
C9orf40-201ENST00000376854 SCGB1D2O95969 90 aa22.01■■□□□ 1.11
C9orf40-201ENST00000376854 IQCF2Q8IXL9 164 aa22.01■■□□□ 1.11
C9orf40-201ENST00000376854 OR1F12Q8NHA8 337 aa22.01■■□□□ 1.11
C9orf40-201ENST00000376854 SF3B5Q9BWJ5 86 aaKnown RBP22.01■■□□□ 1.11
C9orf40-201ENST00000376854 CRLF2Q9HC73 371 aa22.01■■□□□ 1.11
C9orf40-201ENST00000376854 GJE1A6NN92 205 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 C9J4A7 227 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 RNASEK-C17orf49H0YIS7 233 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 JTBO76095 146 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 LCATP04180 440 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 FCGR3AP08637 254 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 RAB11FIP2Q7L804 512 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 SULT4A1Q9BR01 284 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 FREM2Q5SZK8 3169 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 CCDC187A0A096LP49 1063 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 ZNF205O95201 554 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 DTYMKP23919 212 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 TMEM33P57088 247 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 DHRS11Q6UWP2 260 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 BORCS8Q96FH0 119 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 SMIM3Q9BZL3 60 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 KCNIP3Q9Y2W7 256 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 AMDHD2Q9Y303 409 aa22■■□□□ 1.11
C9orf40-201ENST00000376854 AGPAT2O15120 278 aa21.99■■□□□ 1.11
C9orf40-201ENST00000376854 GAPDHP04406 335 aaKnown RBP21.99■■□□□ 1.11
C9orf40-201ENST00000376854 CST2P09228 141 aa21.99■■□□□ 1.11
C9orf40-201ENST00000376854 ZNF728P0DKX0 622 aa21.99■■□□□ 1.11
C9orf40-201ENST00000376854 RBP2P50120 134 aa21.99■■□□□ 1.11
C9orf40-201ENST00000376854 RAC3P60763 192 aa21.99■■□□□ 1.11
C9orf40-201ENST00000376854 SP6Q3SY56 376 aa21.99■■□□□ 1.11
C9orf40-201ENST00000376854 ZNF468Q5VIY5 522 aaPredicted RBP21.99■■□□□ 1.11
C9orf40-201ENST00000376854 BTNL8Q6UX41 500 aa21.99■■□□□ 1.11
C9orf40-201ENST00000376854 PLA2G2EQ9NZK7 142 aa21.99■■□□□ 1.11
C9orf40-201ENST00000376854 SDK2Q58EX2 2172 aa21.99■■□□□ 1.11
C9orf40-201ENST00000376854 SFTA3P0C7M3 94 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 CHATP28329 748 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 NTF4P34130 210 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 MLF1P58340 268 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 ABCA11PQ4W5N1 156 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 LINC00518Q8N0U6 118 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 AGBL5Q8NDL9 886 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 DYRK2Q92630 601 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 PARP11Q9NR21 331 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 TMEM38BQ9NVV0 291 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 NSG1A0A0A6YYJ2 146 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 PATE4P0C8F1 98 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 LHFPL2Q6ZUX7 228 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 NAXEQ8NCW5 288 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 AKR7LQ8NHP1 331 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 ZNF175Q9Y473 711 aa21.98■■□□□ 1.11
C9orf40-201ENST00000376854 CNTRLQ7Z7A1 2325 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 B4GALT1P15291 398 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 BRICD5Q6PL45 260 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 NAA60Q9H7X0 242 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 ZFP57Q9NU63 452 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 GEMIN2O14893 280 aaKnown RBP21.97■■□□□ 1.11
C9orf40-201ENST00000376854 NRASP01111 189 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 OR5AC1P0C628 307 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 ZNF32P17041 273 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 PRKACAP17612 351 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 F2RL1P55085 397 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 PIGYQ3MUY2 71 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 ASCL4Q6XD76 172 aa21.97■■□□□ 1.11
C9orf40-201ENST00000376854 YRDCQ86U90 279 aaKnown RBP21.97■■□□□ 1.11
C9orf40-201ENST00000376854 OR2Y1Q8NGV0 311 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms