RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ZNF679Q8IYX0 411 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 ARHGAP24Q8N264 748 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 OR11H6Q8NGC7 330 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 CHID1Q9BWS9 393 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 TTTY10Q9BZA0 68 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 PRSS22Q9GZN4 317 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 ABCB10Q9NRK6 738 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 OR14J1Q9UGF5 321 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 PITPNC1Q9UKF7 332 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 COPS3Q9UNS2 423 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 POLDIP2Q9Y2S7 368 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 ARL2BPQ9Y2Y0 163 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 CCDC182A6NF36 153 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 B2RBV5 119 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 K7N7A8 449 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 ZNF254O75437 659 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 SRSF10O75494 262 aaKnown RBP11.09□□□□□ -0.63
CXCL12-202ENST00000374426 DCTN3O75935 186 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 TTRP02766 147 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 MRPL3P09001 348 aaKnown RBP11.09□□□□□ -0.63
CXCL12-202ENST00000374426 ZNF728P0DKX0 622 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 JUNBP17275 347 aaPredicted RBP11.09□□□□□ -0.63
CXCL12-202ENST00000374426 MPZP25189 248 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 DYNLT3P51808 116 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 MNAT1P51948 309 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 ERVK11-1P61568 191 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 ZNF829Q3KNS6 432 aaPredicted RBP11.09□□□□□ -0.63
CXCL12-202ENST00000374426 TMEM95Q3KNT9 176 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 CLVS2Q5SYC1 327 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 TMEM236Q5W0B7 351 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 PIGWQ7Z7B1 504 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 ADGRG5Q8IZF4 528 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 HS3ST5Q8IZT8 346 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 WFDC9Q8NEX5 89 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 OR13D1Q8NGV5 346 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 GPR173Q9NS66 373 aa11.09□□□□□ -0.63
CXCL12-202ENST00000374426 DLGAP1O14490 977 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 ZNF737O75373 536 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 PEX14O75381 377 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 RBP4P02753 201 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 IGHV1-8P0DP01 117 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 IGLL1P15814 213 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 RIDAP52758 137 aaKnown RBP11.08□□□□□ -0.64
CXCL12-202ENST00000374426 CD83Q01151 205 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 COL10A1Q03692 680 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 LCN1P1Q5VSP4 162 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 ASRGL1Q7L266 308 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 TCF23Q7RTU1 214 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 ANGPTL5Q86XS5 388 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 ASCC1Q8N9N2 400 aaKnown RBP11.08□□□□□ -0.64
CXCL12-202ENST00000374426 ASB17Q8WXJ9 295 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 OCSTAMPQ9BR26 566 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 SLC25A19Q9HC21 320 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 SLC22A13Q9Y226 551 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 V9GYS6 101 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 DSCAML1Q8TD84 2053 aa11.08□□□□□ -0.64
CXCL12-202ENST00000374426 A0A1B0GTI1 187 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 A0A1W2PRX2 142 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 A6NIN4 97 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 F2RL2O00254 374 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 CD33P20138 364 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 PRKACGP22612 351 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 VDAC2P45880 294 aaPredicted RBP11.07□□□□□ -0.64
CXCL12-202ENST00000374426 EDDM3BP56851 147 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 ESRRGP62508 458 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 DYNC1I2Q13409 638 aaKnown RBP11.07□□□□□ -0.64
CXCL12-202ENST00000374426 OR14K1Q8NGZ2 314 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 CCDC124Q96CT7 223 aaKnown RBP11.07□□□□□ -0.64
CXCL12-202ENST00000374426 ASB9Q96DX5 294 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 ZNF556Q9HAH1 456 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 IKZF2Q9UKS7 526 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 GTF2A1LQ9UNN4 478 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 HILPDAQ9Y5L2 63 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 TMEM14AQ9Y6G1 99 aa11.07□□□□□ -0.64
CXCL12-202ENST00000374426 FAM90A22PA8MWA6 464 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 LOC110117498-PIK3R3F6TDL0 507 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 F8VVB4 439 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 F8VWA3 439 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 K7EIL1 84 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 GNGT2O14610 69 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 MAGEB4O15481 346 aaPredicted RBP11.06□□□□□ -0.64
CXCL12-202ENST00000374426 MPIG6BO95866 241 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 OR12D2P58182 307 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 ACTA2P62736 377 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 ACTG2P63267 376 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 ACTC1P68032 377 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 ACTA1P68133 377 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 IL24Q13007 206 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 SNAPC1Q16533 368 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 ARSJQ5FYB0 599 aaPredicted RBP11.06□□□□□ -0.64
CXCL12-202ENST00000374426 VAX1Q5SQQ9 334 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 BCL2L15Q5TBC7 163 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 Q6ZSR3 168 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 ELMOD2Q8IZ81 293 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 OR8H2Q8N162 312 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 OR5AU1Q8NGC0 362 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 CANT1Q8WVQ1 401 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 LRGUKQ96M69 825 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 APOL4Q9BPW4 351 aa11.06□□□□□ -0.64
CXCL12-202ENST00000374426 PKIBQ9C010 78 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms