RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 RPS10-NUDT3A0A1W2PQS6 291 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 IGSF23A1L1A6 192 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 PRORSD1PA6NEY8 169 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 CCDC160A6NGH7 325 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 CLDN24A6NM45 220 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 C17orf105B2RV13 164 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 ANKRD63C9JTQ0 380 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 H3BMH7 237 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 PLPP1O14494 284 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 WNT9BO14905 357 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 TIMM23O14925 209 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 EDIL3O43854 480 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 MPDU1O75352 247 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 ANXA9O76027 345 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 RLN2P04090 185 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 SERPINA7P05543 415 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 GIPP09681 153 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 H2BFMP0C1H6 154 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 LIPCP11150 499 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 PSG1P11464 419 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 GABRA1P14867 456 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 FOLR1P15328 257 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 CD58P19256 250 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 AK4P27144 223 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 CD200P41217 278 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 KLF3P57682 345 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 OR10A3P58181 314 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 GNG3P63215 75 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 EMX2Q04743 252 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 ZNF616Q08AN1 781 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 PLA2G7Q13093 441 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 KIAA0141Q14154 515 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 ABRAXAS2Q15018 415 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 TBC1D28Q2M2D7 210 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 TRMT5Q32P41 509 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 LIN52Q52LA3 116 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 TP53I3Q53FA7 332 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 ZNF542PQ5EBM4 170 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 VWA2Q5GFL6 755 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 TCTEX1D4Q5JR98 221 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 OR10J3Q5JRS4 329 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 GGNBP1Q5YKI7 109 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 SMARCD3Q6STE5 483 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 PLET1Q6UQ28 207 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 SHFQ7M4L6 423 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 LRRC28Q86X40 367 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 C10orf107Q8IVU9 208 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 SLC30A8Q8IWU4 369 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 SLC35F2Q8IXU6 374 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 RDH10Q8IZV5 341 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 CADM2Q8N3J6 435 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 TMEM99Q8N816 258 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 OR4M2Q8NGB6 313 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 OR5H6Q8NGV6 325 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 OR56B4Q8NH76 319 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 SMAP2Q8WU79 429 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 UCN3Q969E3 161 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 ZNF599Q96NL3 588 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 KCNA7Q96RP8 456 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 CPXM1Q96SM3 734 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 DOK1Q99704 481 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 PDCD10Q9BUL8 212 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 TRAF4Q9BUZ4 470 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 CCDC32Q9BV29 185 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 FAM96AQ9H5X1 160 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 Q9H8V8 135 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 FGF21Q9NSA1 209 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 RASL12Q9NYN1 266 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 TAS2R13Q9NYV9 303 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 SLC25A37Q9NYZ2 338 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 BFARQ9NZS9 450 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 WRAP73Q9P2S5 460 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 GNG8Q9UK08 70 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 PILRAQ9UKJ1 303 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 RCL1Q9Y2P8 373 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 TMED3Q9Y3Q3 217 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 ETV7Q9Y603 341 aa4.28□□□□□ -1.72
ECHDC1-204ENST00000368292 TDRD6O60522 2096 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ZCWPW2A0A1B0GU75 182 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 TINCRA0A1B0GVN0 87 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 SMIM31A0A1B0GVY4 71 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ANKRD20A5PA0PJZ0 165 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 FAM74A7A6NL05 159 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 B4DGG1 531 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ZNF878C9JN71 531 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 C15orf65H3BRN8 121 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 SLC17A3O00476 420 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 SIGLEC5O15389 551 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 PHF1O43189 567 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ERI3O43414 337 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ALOX12BO75342 701 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 TRAPPC6AO75865 159 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ATP5LO75964 103 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 BMP15O95972 392 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 PAK4O96013 591 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 IGHV4-34P06331 123 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 NGFRP08138 427 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 TSPAN19P0C672 248 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 DUX4L4P0CJ87 422 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 LIMS3P0CW19 117 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms