RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 OR51F2Q8NH61 342 aa14.42□□□□□ -0.1
SAMM50-201ENST00000350028 GMPPAQ96IJ6 420 aaPredicted RBP14.42□□□□□ -0.1
SAMM50-201ENST00000350028 ZNF701Q9NV72 531 aaPredicted RBP14.42□□□□□ -0.1
SAMM50-201ENST00000350028 CSAG2Q9Y5P2 127 aa14.42□□□□□ -0.1
SAMM50-201ENST00000350028 FREM1Q5H8C1 2179 aa14.42□□□□□ -0.1
SAMM50-201ENST00000350028 TRAV17A0A0B4J275 112 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 A0A0B4J2A0 478 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 GFRA3O60609 400 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 NOS1APO75052 506 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-201ENST00000350028 RPA2P15927 270 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 APLNRP35414 380 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 PRDX4Q13162 271 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 TMEM65Q6PI78 240 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 OR8H3Q8N146 312 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 CASTOR1Q8WTX7 329 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 CMSS1Q9BQ75 279 aaKnown RBP14.41□□□□□ -0.1
SAMM50-201ENST00000350028 FAAP24Q9BTP7 215 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 PDCD10Q9BUL8 212 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 C5orf66Q9H5L9 145 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 COMMD9Q9P000 198 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 SHPKQ9UHJ6 478 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 STARD10Q9Y365 291 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 DNAJC13O75165 2243 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 TRAV14DV4A0A0A6YYC5 116 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 PQLC2LA1A4F0 135 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 LINC00862A6NCI5 91 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 OR5H14A6NHG9 310 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 SDCBPO00560 298 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-201ENST00000350028 SFT2D2O95562 160 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 IL18BPO95998 194 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 CCL2P13500 99 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 WT1P19544 449 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-201ENST00000350028 PMELP40967 661 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 PMP22Q01453 160 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 HLXQ14774 488 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-201ENST00000350028 C6orf183Q5T699 404 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 AADACL3Q5VUY0 350 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 C3P1Q6ZMU1 363 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 SAXO1Q8IYX7 474 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 FBXL14Q8N1E6 418 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 Q8NFD4 153 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 MAFIPQ8WZ33 124 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 PAPOLGQ9BWT3 736 aaKnown RBP14.41□□□□□ -0.1
SAMM50-201ENST00000350028 AK3Q9UIJ7 227 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 GPR160Q9UJ42 338 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 ST3GAL6Q9Y274 331 aa14.41□□□□□ -0.1
SAMM50-201ENST00000350028 FREM2Q5SZK8 3169 aa14.4□□□□□ -0.1
SAMM50-201ENST00000350028 DBX1A6NMT0 343 aa14.4□□□□□ -0.1
SAMM50-201ENST00000350028 CFDP00746 253 aaPredicted RBP14.4□□□□□ -0.1
SAMM50-201ENST00000350028 SLC25A4P12235 298 aa14.4□□□□□ -0.1
SAMM50-201ENST00000350028 ARPC4P59998 168 aa14.4□□□□□ -0.1
SAMM50-201ENST00000350028 CLN3Q13286 438 aa14.4□□□□□ -0.1
SAMM50-201ENST00000350028 CLLU1Q5K131 121 aa14.4□□□□□ -0.1
SAMM50-201ENST00000350028 ZDHHC23Q8IYP9 409 aa14.4□□□□□ -0.1
SAMM50-201ENST00000350028 TMEM230Q96A57 120 aa14.4□□□□□ -0.1
SAMM50-201ENST00000350028 WBP1Q96G27 269 aa14.4□□□□□ -0.1
SAMM50-201ENST00000350028 RTBDNQ9BSG5 229 aaPredicted RBP14.4□□□□□ -0.1
SAMM50-201ENST00000350028 MFFQ9GZY8 342 aa14.4□□□□□ -0.1
SAMM50-201ENST00000350028 ANXA10Q9UJ72 324 aa14.4□□□□□ -0.1
SAMM50-201ENST00000350028 CELSR3Q9NYQ7 3312 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 PTPRBP23467 1997 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A10PA6NDY2 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A18PA6NE21 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A16PA6NEW6 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 TUBAL3A6NHL2 446 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A20PA6NIJ5 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A8PA6NJQ4 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A7PA6NKC0 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 ZNF891A8MT65 544 aaPredicted RBP14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A22PA8MWA6 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A12PA8MX19 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A5PA8MXJ8 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A23PA8MXZ1 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 GEMIN2O14893 280 aaKnown RBP14.39□□□□□ -0.11
SAMM50-201ENST00000350028 PDCD6O75340 191 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 SFTPBP07988 381 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A15PP0C7V4 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A13PP0C7W8 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A14PP0C7W9 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 FAM90A24PP0C7X0 464 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 RAB14P61106 215 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 CEACAM21Q3KPI0 293 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 PIGYQ3MUY2 71 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 KCTD9Q7L273 389 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 ZNF611Q8N823 705 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 OR5L1Q8NGL2 311 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 SULT4A1Q9BR01 284 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 ARL6Q9H0F7 186 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 CLCF1Q9UBD9 225 aa14.39□□□□□ -0.11
SAMM50-201ENST00000350028 IGKV1D-8A0A087WSZ0 117 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 PRSS44E7EML9 344 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 CCSO14618 274 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 RP2O75695 350 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 NGFP01138 241 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 RBM11P57052 281 aaKnown RBP14.38□□□□□ -0.11
SAMM50-201ENST00000350028 HIKESHIQ53FT3 197 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 SLC25A26Q70HW3 274 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 ZNF546Q86UE3 836 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 TMEM200AQ86VY9 491 aa14.38□□□□□ -0.11
SAMM50-201ENST00000350028 CALHM1Q8IU99 346 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms