RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 ISL1P61371 349 aa14.49□□□□□ -0.09
HDDC3-201ENST00000330334 RPL31P62899 125 aaKnown RBP14.49□□□□□ -0.09
HDDC3-201ENST00000330334 KLRD1Q13241 179 aa14.49□□□□□ -0.09
HDDC3-201ENST00000330334 AANATQ16613 207 aa14.49□□□□□ -0.09
HDDC3-201ENST00000330334 TMEM200BQ69YZ2 307 aa14.49□□□□□ -0.09
HDDC3-201ENST00000330334 KCTD20Q7Z5Y7 419 aa14.49□□□□□ -0.09
HDDC3-201ENST00000330334 C11orf42Q8N5U0 333 aa14.49□□□□□ -0.09
HDDC3-201ENST00000330334 OR10H4Q8NGA5 316 aa14.49□□□□□ -0.09
HDDC3-201ENST00000330334 ZNF488Q96MN9 340 aa14.49□□□□□ -0.09
HDDC3-201ENST00000330334 TBX5Q99593 518 aa14.49□□□□□ -0.09
HDDC3-201ENST00000330334 HEXA-AS1Q9H8Q6 139 aa14.49□□□□□ -0.09
HDDC3-201ENST00000330334 SEBOXQ9HB31 216 aaPredicted RBP14.49□□□□□ -0.09
HDDC3-201ENST00000330334 ELL3Q9HB65 397 aaPredicted RBP14.49□□□□□ -0.09
HDDC3-201ENST00000330334 C19orf12Q9NSK7 152 aa14.49□□□□□ -0.09
HDDC3-201ENST00000330334 A6NIN4 97 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 GATBO75879 557 aaKnown RBP14.48□□□□□ -0.09
HDDC3-201ENST00000330334 SERPINA3P01011 423 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 TK1P04183 234 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 ALPLP05186 524 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 FUT6P51993 359 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 PROK1P58294 105 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 PRB3Q04118 309 aaPredicted RBP14.48□□□□□ -0.09
HDDC3-201ENST00000330334 UBE2V2Q15819 145 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 FAM185AQ8N0U4 392 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 HRASLS5Q96KN8 279 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 ADI1Q9BV57 179 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 CHST5Q9GZS9 411 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 MEGF9Q9H1U4 602 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 PLEKHA1Q9HB21 404 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 USE1Q9NZ43 259 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 VWFP04275 2813 aa14.48□□□□□ -0.09
HDDC3-201ENST00000330334 E9PQ18 207 aa14.47□□□□□ -0.09
HDDC3-201ENST00000330334 K7N7A8 449 aa14.47□□□□□ -0.09
HDDC3-201ENST00000330334 UBCP0CG48 685 aaKnown RBP14.47□□□□□ -0.09
HDDC3-201ENST00000330334 SNRPGP62308 76 aaKnown RBP14.47□□□□□ -0.09
HDDC3-201ENST00000330334 DHRS7BQ6IAN0 325 aaPredicted RBP14.47□□□□□ -0.09
HDDC3-201ENST00000330334 Q6ZSV7 163 aa14.47□□□□□ -0.09
HDDC3-201ENST00000330334 ANGPTL5Q86XS5 388 aa14.47□□□□□ -0.09
HDDC3-201ENST00000330334 PRSS35Q8N3Z0 413 aa14.47□□□□□ -0.09
HDDC3-201ENST00000330334 PP6455Q8WZ26 134 aa14.47□□□□□ -0.09
HDDC3-201ENST00000330334 RNF166Q96A37 237 aaPredicted RBP14.47□□□□□ -0.09
HDDC3-201ENST00000330334 AJUBAQ96IF1 538 aa14.47□□□□□ -0.09
HDDC3-201ENST00000330334 A0A1W2PRD5 423 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 A0A1W2PRF3 423 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 A0A1W2PRM7 423 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 SAC3D1A6NKF1 404 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 J3QRE1 110 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 TIMM23O14925 209 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 APOL3O95236 402 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 CHRM2P08172 466 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 ACTC1P68032 377 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 ACTA1P68133 377 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 ZNF85Q03923 595 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 SRSF4Q08170 494 aaKnown RBP14.46□□□□□ -0.09
HDDC3-201ENST00000330334 MEDAGQ5VYS4 303 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 ZFP1Q6P2D0 407 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 FDX2Q6P4F2 183 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 BRICD5Q6PL45 260 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 EGFL6Q8IUX8 553 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 MKXQ8IYA7 352 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 PNKDQ8N490 385 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 DNAAF1Q8NEP3 725 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 PYDC1Q8WXC3 89 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 IMPAD1Q9NX62 359 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 MTCH1Q9NZJ7 389 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 ORC6Q9Y5N6 252 aa14.46□□□□□ -0.09
HDDC3-201ENST00000330334 IGKV1-27A0A075B6S5 117 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 FAM230AA0A1W2PPH8 454 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 ANGPTL7O43827 346 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 RBP4P02753 201 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 ISG15P05161 165 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 KRTAP10-3P60369 221 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 ODF4Q2M2E3 257 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 TMEM244Q5VVB8 128 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 FAM220AQ7Z4H9 259 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 C10orf67Q8IYJ2 551 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 OR2G2Q8NGZ5 317 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 UBE2FQ969M7 185 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 CEP19Q96LK0 163 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 GNG8Q9UK08 70 aa14.45□□□□□ -0.1
HDDC3-201ENST00000330334 WNK1Q9H4A3 2382 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 C17orf98A8MV24 154 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 H3BNX3 289 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 M0QZ24 198 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 WIPF1O43516 503 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 ZNF737O75373 536 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 KIR3DL2P43630 455 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 CEBPDP49716 269 aaPredicted RBP14.44□□□□□ -0.1
HDDC3-201ENST00000330334 ALDH3A2P51648 485 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 ERVFRD-1P60508 538 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 CNN3Q15417 329 aaKnown RBP14.44□□□□□ -0.1
HDDC3-201ENST00000330334 UTS2BQ765I0 119 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 Q8IYB0 196 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 OR4M1Q8NGD0 313 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 TRMT10AQ8TBZ6 339 aaKnown RBP14.44□□□□□ -0.1
HDDC3-201ENST00000330334 BORCS8Q96FH0 119 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 SSX3Q99909 188 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 FBLN5Q9UBX5 448 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 OR14J1Q9UGF5 321 aa14.44□□□□□ -0.1
HDDC3-201ENST00000330334 LOC107986453A0A1B0GWG9 222 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms