RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 TMEM268Q5VZI3 342 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 AKR7LQ8NHP1 331 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 NUDT16L1Q9BRJ7 211 aaKnown RBP17.31■□□□□ 0.36
CRLF3-201ENST00000324238 FBXO7Q9Y3I1 522 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 NBEAQ8NFP9 2946 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 hCG_1809904A0A1W2PP81 198 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 A0A1W2PR64 198 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 A0A1W2PRV1 198 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 TSPAN15O95858 294 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 CST4P01036 141 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 PET100P0DJ07 73 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 CCL1P22362 96 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 SULT1A2P50226 295 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 GRB2P62993 217 aaKnown RBP17.31■□□□□ 0.36
CRLF3-201ENST00000324238 SMCO1Q147U7 214 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 MEX3BQ6ZN04 569 aaKnown RBP17.31■□□□□ 0.36
CRLF3-201ENST00000324238 MEMO1Q9Y316 297 aa17.31■□□□□ 0.36
CRLF3-201ENST00000324238 GEMIN2O14893 280 aaKnown RBP17.3■□□□□ 0.36
CRLF3-201ENST00000324238 DEDDO75618 318 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 PRH1P02810 166 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 CD5P06127 495 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 CCL3P10147 92 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 CEBPGP53567 150 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 RSU1Q15404 277 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 ZNF774Q6NX45 483 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 SPACA1Q9HBV2 294 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 ANXA10Q9UJ72 324 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 EDARQ9UNE0 448 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 NPIPA2E9PIF3 369 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 C3orf80F5H4A9 247 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 NPIPA3F8WFD2 350 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 TNFSF11O14788 317 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 CBX5P45973 191 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 MEOX2P50222 304 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 HIST3H3Q16695 136 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 PLXDC2Q6UX71 529 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 GJC3Q8NFK1 279 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 OR9K2Q8NGE7 335 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 HAS2Q92819 552 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 MR1Q95460 341 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 SAT2Q96F10 170 aaPredicted RBP17.3■□□□□ 0.36
CRLF3-201ENST00000324238 TGIF2Q9GZN2 237 aa17.3■□□□□ 0.36
CRLF3-201ENST00000324238 A0A1W2PPH5 198 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 TLX3O43711 291 aaPredicted RBP17.29■□□□□ 0.36
CRLF3-201ENST00000324238 IFNA21P01568 189 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 ACAA1P09110 424 aaPredicted RBP17.29■□□□□ 0.36
CRLF3-201ENST00000324238 OR13C7P0DN81 318 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 OMGP23515 440 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 RABEPKQ7Z6M1 372 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 DNAJB11Q9UBS4 358 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 CACFD1Q9UGQ2 172 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 NTF4P34130 210 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 OR2B8PP59922 312 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 LPAL2Q16609 132 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 ABCA11PQ4W5N1 156 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 CD300LFQ8TDQ1 290 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 RTN4IP1Q8WWV3 396 aaPredicted RBP17.29■□□□□ 0.36
CRLF3-201ENST00000324238 CHST5Q9GZS9 411 aa17.29■□□□□ 0.36
CRLF3-201ENST00000324238 PTRH2Q9Y3E5 179 aaKnown RBP17.29■□□□□ 0.36
CRLF3-201ENST00000324238 CHCHD2Q9Y6H1 151 aaPredicted RBP17.29■□□□□ 0.36
CRLF3-201ENST00000324238 COL5A1P20908 1838 aaPredicted RBP17.29■□□□□ 0.36
CRLF3-201ENST00000324238 IGHV3-9P01782 118 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 AWAT1Q58HT5 328 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 SPEM1Q8N4L4 309 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 TMEM156Q8N614 296 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 DNASE2BQ8WZ79 361 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 NELFAQ9H3P2 528 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 FANCFQ9NPI8 374 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 CCDC187A0A096LP49 1063 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 SERPINE3A8MV23 424 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 FAM157AC9JC47 383 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 LCATP04180 440 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 CD63P08962 238 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 SLC22A25Q6T423 547 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 NABP1Q96AH0 204 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 ALKBH3Q96Q83 286 aaPredicted RBP17.28■□□□□ 0.36
CRLF3-201ENST00000324238 ULBP2Q9BZM5 246 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 CEP192Q8TEP8 1941 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 MSX1P28360 303 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 CLINT1Q14677 625 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 HLA-BQ31612 363 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 ZNF468Q5VIY5 522 aaPredicted RBP17.28■□□□□ 0.36
CRLF3-201ENST00000324238 EIF5AL1Q6IS14 154 aaKnown RBP17.28■□□□□ 0.36
CRLF3-201ENST00000324238 ABHD14AQ9BUJ0 271 aa17.28■□□□□ 0.36
CRLF3-201ENST00000324238 IGLV3-12A0A075B6K2 115 aa17.27■□□□□ 0.36
CRLF3-201ENST00000324238 CRYM-AS1A6NIL9 109 aa17.27■□□□□ 0.36
CRLF3-201ENST00000324238 ATXN7O15265 892 aaPredicted RBP17.27■□□□□ 0.36
CRLF3-201ENST00000324238 DHHO43323 396 aa17.27■□□□□ 0.36
CRLF3-201ENST00000324238 ZNF806P0C7X5 589 aa17.27■□□□□ 0.36
CRLF3-201ENST00000324238 B4GALT1P15291 398 aa17.27■□□□□ 0.36
CRLF3-201ENST00000324238 FBXL14Q8N1E6 418 aa17.27■□□□□ 0.36
CRLF3-201ENST00000324238 HIST1H2BAQ96A08 127 aa17.27■□□□□ 0.36
CRLF3-201ENST00000324238 SMOC1Q9H4F8 434 aa17.27■□□□□ 0.36
CRLF3-201ENST00000324238 ZDHHC8Q9ULC8 765 aa17.27■□□□□ 0.36
CRLF3-201ENST00000324238 FREM1Q5H8C1 2179 aa17.27■□□□□ 0.36
CRLF3-201ENST00000324238 ZNF728P0DKX0 622 aa17.27■□□□□ 0.35
CRLF3-201ENST00000324238 ZNF44P15621 663 aa17.27■□□□□ 0.35
CRLF3-201ENST00000324238 THBS4P35443 961 aa17.27■□□□□ 0.35
CRLF3-201ENST00000324238 CAMLGP49069 296 aa17.27■□□□□ 0.35
CRLF3-201ENST00000324238 DVL1P1P54792 670 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms