RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 PHYHD1Q5SRE7 291 aa16.66■□□□□ 0.26
RTN4-201ENST00000317610 TMEM156Q8N614 296 aa16.66■□□□□ 0.26
RTN4-201ENST00000317610 WDSUB1Q8N9V3 476 aa16.66■□□□□ 0.26
RTN4-201ENST00000317610 PCED1AQ9H1Q7 454 aa16.66■□□□□ 0.26
RTN4-201ENST00000317610 C19orf12Q9NSK7 152 aa16.66■□□□□ 0.26
RTN4-201ENST00000317610 NECAP2Q9NVZ3 263 aa16.66■□□□□ 0.26
RTN4-201ENST00000317610 A6NLC8 198 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 OR2J2O76002 312 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 OR5AC1P0C628 307 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 H3F3AP84243 136 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 RAB30Q15771 203 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 SLC16A13Q7RTY0 426 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 LURAP1LQ8IV03 231 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 TCEAL7Q9BRU2 100 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 SUCNR1Q9BXA5 334 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 LMAN1LQ9HAT1 526 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 AK3Q9UIJ7 227 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 ZDHHC8Q9ULC8 765 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 A0A1B0GW64 132 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 A0A1W2PPH5 198 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 ZNF728P0DKX0 622 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 RAB5AP20339 215 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 GUCA1AP43080 201 aaPredicted RBP16.65■□□□□ 0.26
RTN4-201ENST00000317610 CAMLGP49069 296 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 ZNF616Q08AN1 781 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 IL13RA2Q14627 380 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 RHEBQ15382 184 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 CLEC9AQ6UXN8 241 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 CPEB2Q7Z5Q1 589 aaKnown RBP16.65■□□□□ 0.26
RTN4-201ENST00000317610 SLC22A8Q8TCC7 542 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 FAAP24Q9BTP7 215 aa16.65■□□□□ 0.26
RTN4-201ENST00000317610 LINC00587B1AMM8 73 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 FABP1P07148 127 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 MYF5P13349 255 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 CBR1P16152 277 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 LIAT1Q6ZQX7 453 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 RTN4IP1Q8WWV3 396 aaPredicted RBP16.64■□□□□ 0.25
RTN4-201ENST00000317610 SPSB1Q96BD6 273 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 GNRHR2Q96P88 292 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 METTL9Q9H1A3 318 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 M0R135 149 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 MAS1LP35410 378 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 SP6Q3SY56 376 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 TCEAL3Q969E4 200 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 ISOC2Q96AB3 205 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 SPACA9Q96E40 222 aaPredicted RBP16.64■□□□□ 0.25
RTN4-201ENST00000317610 ZNF799Q96GE5 643 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 ANGPTL4Q9BY76 406 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 GSN-AS1Q9NRJ2 163 aa16.64■□□□□ 0.25
RTN4-201ENST00000317610 SPAG17Q6Q759 2223 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.63■□□□□ 0.25
RTN4-201ENST00000317610 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.63■□□□□ 0.25
RTN4-201ENST00000317610 M0R036 132 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 ZNF806P0C7X5 589 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 FABP9Q0Z7S8 132 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 LYZL2Q7Z4W2 148 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 OR1J1Q8NGS3 322 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 EIF5A2Q9GZV4 153 aaKnown RBP16.63■□□□□ 0.25
RTN4-201ENST00000317610 ZMAT5Q9UDW3 170 aaKnown RBP16.63■□□□□ 0.25
RTN4-201ENST00000317610 UMAD1C9J7I0 102 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 TIAF1O95411 115 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 CD63P08962 238 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 ZNF14P17017 642 aaPredicted RBP16.63■□□□□ 0.25
RTN4-201ENST00000317610 CHATP28329 748 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 FHITP49789 147 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 RRADP55042 308 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 MTCP1P56278 107 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 TGIF1Q15583 401 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 ABCA11PQ4W5N1 156 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.63■□□□□ 0.25
RTN4-201ENST00000317610 SLC25A45Q8N413 288 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 TOMM40LQ969M1 308 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 SGK3Q96BR1 496 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 MSI2Q96DH6 328 aaKnown RBP16.63■□□□□ 0.25
RTN4-201ENST00000317610 SLC35B3Q9H1N7 401 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 GPR173Q9NS66 373 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 MTCH2Q9Y6C9 303 aa16.63■□□□□ 0.25
RTN4-201ENST00000317610 ARID1AO14497 2285 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 ZNF850A8MQ14 1090 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 TERTO14746 1132 aaKnown RBP16.62■□□□□ 0.25
RTN4-201ENST00000317610 TOX3O15405 576 aaPredicted RBP16.62■□□□□ 0.25
RTN4-201ENST00000317610 DIRAS3O95661 229 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 DUSP1P28562 367 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 SULT1A1P50225 295 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 KRBOX4Q5JUW0 171 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 ASCL4Q6XD76 172 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 TMEM123Q8N131 208 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 RASL10BQ96S79 203 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 PBDC1Q9BVG4 233 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 DHHO43323 396 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 XRCC2O43543 280 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 DBHP09172 617 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 DAOP14920 347 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 RAB1AP62820 205 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 TAF9Q16594 264 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 SNAI3Q3KNW1 292 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 LFNGQ8NES3 379 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 SPTSSAQ969W0 71 aa16.62■□□□□ 0.25
RTN4-201ENST00000317610 MARS2Q96GW9 593 aaKnown RBP16.62■□□□□ 0.25
RTN4-201ENST00000317610 SH3BGRL3Q9H299 93 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms