RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PRSS50Q9UI38 385 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 GJB3O75712 270 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 KLKB1P03952 638 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 POLR2IP36954 125 aaKnown RBP10.86□□□□□ -0.67
PCF11-201ENST00000298281 RAB9AP51151 201 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 TWIST1Q15672 202 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 GHITMQ9H3K2 345 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 HDGFL3Q9Y3E1 203 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 LAMB4A4D0S4 1761 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 IFITM10A6NMD0 228 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 ZBTB42B2RXF5 422 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 KRASP01116 189 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 RPEL1Q2QD12 228 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 SPANXN1Q5VSR9 72 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 OR2A2Q6IF42 318 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 TMEM179BQ7Z7N9 219 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 PELI1Q96FA3 418 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 DEFB108AA8MXU0 73 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 PF4P02776 101 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 ZNF26P17031 533 aaPredicted RBP10.86□□□□□ -0.67
PCF11-201ENST00000298281 CD80P33681 288 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 PMS2P11Q13670 270 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 VRK3Q8IV63 474 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 SMIM14Q96QK8 99 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 GSX2Q9BZM3 304 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 LPAR5Q9H1C0 372 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 H3BP45 60 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 HTRA3P83110 453 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 GCSAMLQ5JQS6 135 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 PDPNQ86YL7 162 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 UBALD2Q8IYN6 164 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 OR4C16Q8NGL9 310 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 FZD6O60353 706 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 THBS4P35443 961 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 FAM53BQ14153 422 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 OR8I2Q8N0Y5 310 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 DYRK2Q92630 601 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 KDM3BQ7LBC6 1761 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 AGFG2O95081 481 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 DDOSTP39656 456 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 DIO1P49895 249 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 CLLU1Q5K131 121 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 MEGF10Q96KG7 1140 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 SNX22Q96L94 193 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 S1PR5Q9H228 398 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 ASH2LQ9UBL3 628 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 SUCLG1P53597 346 aaKnown RBP10.85□□□□□ -0.67
PCF11-201ENST00000298281 PELI3Q8N2H9 469 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 TBX15Q96SF7 602 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 TMPRSS2O15393 492 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 HIST1H1EP10412 219 aaKnown RBP10.85□□□□□ -0.67
PCF11-201ENST00000298281 SUMO3P55854 103 aaPredicted RBP10.85□□□□□ -0.67
PCF11-201ENST00000298281 TAGLNQ01995 201 aaKnown RBP10.85□□□□□ -0.67
PCF11-201ENST00000298281 PJVKQ0ZLH3 352 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 TMEM211Q6ICI0 200 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 OR2W3Q7Z3T1 314 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 OR2D3Q8NGH3 330 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 GPX8Q8TED1 209 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 MEX3AA1L020 520 aaKnown RBP10.85□□□□□ -0.67
PCF11-201ENST00000298281 OR5B21A6NL26 309 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 GNG7O60262 68 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 FGF2P09038 288 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 OR4E1P0C645 316 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 CALCRP30988 508 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 C10orf90Q96M02 699 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 SPACA5Q96QH8 159 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 GABARAPL3Q9BY60 117 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 CHODLQ9H9P2 273 aa10.85□□□□□ -0.67
PCF11-201ENST00000298281 GFYI3L273 518 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 IGHV3-13P01766 116 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 IGHV3-7P01780 117 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 SHBQ15464 509 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 BAK1Q16611 211 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 LGALSLQ3ZCW2 172 aaPredicted RBP10.84□□□□□ -0.67
PCF11-201ENST00000298281 PAQR6Q6TCH4 344 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 PFN4Q8NHR9 129 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 BAHD1Q8TBE0 780 aaPredicted RBP10.84□□□□□ -0.67
PCF11-201ENST00000298281 NWD2Q9ULI1 1742 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 KIF26BQ2KJY2 2108 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 ARRDC5A6NEK1 342 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 PSMB6P28072 239 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 CLDN18P56856 261 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 FAM53AQ6NSI3 398 aaPredicted RBP10.84□□□□□ -0.67
PCF11-201ENST00000298281 CDCA4Q9BXL8 241 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 MFNGO00587 321 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 C1QBP02746 253 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 ASAH1Q13510 395 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 EBLN2Q6P2I7 272 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 BCORP1Q8N888 145 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 COPS9Q8WXC6 57 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 CCDC187A0A096LP49 1063 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 MFSD2BA6NFX1 497 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 HLA-GP17693 338 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 WDR73Q6P4I2 378 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 OR51E1Q8TCB6 317 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 BOLA1Q9Y3E2 137 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 DOT1LQ8TEK3 1739 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 FCN1O00602 326 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 CEACAM6P40199 344 aa10.84□□□□□ -0.67
PCF11-201ENST00000298281 TNXAQ16473 311 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms