RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 M0QZ24 198 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 M0R296 226 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 CRYBA1P05813 215 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 TRAPPC2P0DI81 140 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 TRAPPC2BP0DI82 140 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 OR3A1P47881 315 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 VMA21Q3ZAQ7 101 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 TSPO2Q5TGU0 170 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 NHLRC1Q6VVB1 395 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 ZAR1Q86SH2 424 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 OR4D11Q8NGI4 311 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 SPSB1Q96BD6 273 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 GOLT1BQ9Y3E0 138 aa16.6■□□□□ 0.25
SMARCC1-201ENST00000254480 DUS4LO95620 317 aaKnown RBP16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 RNF151Q2KHN1 245 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 OR13G1Q8NGZ3 307 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 RASL10BQ96S79 203 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 GABRG3Q99928 467 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 BCL2L11O43521 198 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 FFAR4Q5NUL3 377 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 SIGLECL1Q8N7X8 197 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 OR1A1Q9P1Q5 309 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 ALX3O95076 343 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 SELENOPP49908 381 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 C11orf87Q6NUJ2 197 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 TGIF2LXQ8IUE1 241 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 HMGCLL1Q8TB92 370 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 MYOZ1Q9NP98 299 aaPredicted RBP16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 CYSLTR2Q9NS75 346 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 FLRT3Q9NZU0 649 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 KLF3P57682 345 aaPredicted RBP16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 KRTDAPP60985 99 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 TCFL5Q9UL49 500 aa16.59■□□□□ 0.25
SMARCC1-201ENST00000254480 SH2D7A6NKC9 451 aaPredicted RBP16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 TMPRSS2O15393 492 aa16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 CTAG2O75638 210 aa16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 GLDNQ6ZMI3 551 aaPredicted RBP16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 MUC20Q8N307 709 aaPredicted RBP16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 SLIRPQ9GZT3 109 aaKnown RBP16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 DOCK1Q14185 1865 aa16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 KIAA1551Q9HCM1 1747 aa16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 OR2M5A3KFT3 312 aa16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 MIDNQ504T8 468 aa16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 DHRS7BQ6IAN0 325 aaPredicted RBP16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 CCDC190Q86UF4 302 aa16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 OR8B12Q8NGG6 310 aa16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 ABHD14AQ9BUJ0 271 aa16.58■□□□□ 0.25
SMARCC1-201ENST00000254480 PCM1Q15154 2024 aa16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 TRAV39A0A0B4J263 110 aa16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 MBP02144 154 aa16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 EIF3IQ13347 325 aaKnown RBP16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 SLC25A22Q9H936 323 aa16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 RHOFQ9HBH0 211 aa16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 FAM24AA6NFZ4 105 aa16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 TO15178 435 aa16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 FGF8P55075 233 aaPredicted RBP16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 ABI3BPQ7Z7G0 1075 aa16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 FABP4P15090 132 aa16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 FAM3AP98173 230 aa16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 ABHD3Q8WU67 409 aa16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 HSD17B10Q99714 261 aaKnown RBP16.58■□□□□ 0.24
SMARCC1-201ENST00000254480 IGKV3-7A0A075B6H7 116 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 PLPP2O43688 288 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 TMEM108Q6UXF1 575 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 OR1L4Q8NGR5 311 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 UCN2Q96RP3 112 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 ZDHHC11Q9H8X9 412 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 OR5AC1P0C628 307 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 CACNG5Q9UF02 275 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 CPN1P15169 458 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 MESP2Q0VG99 397 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 ZNF485Q8NCK3 441 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 CCL3P10147 92 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 FPR2P25090 351 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 LSM11P83369 360 aaKnown RBP eCLIP16.57■□□□□ 0.245e-12■■■□□ 15.9
SMARCC1-201ENST00000254480 LPAR2Q9HBW0 351 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 NPTNQ9Y639 398 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 POMT1Q9Y6A1 747 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 LRP5O75197 1615 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 CNN1P51911 297 aaKnown RBP16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 RAB32Q13637 225 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 RHBDD2Q6NTF9 364 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 UBTD1Q9HAC8 227 aa16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 ZNF275Q9NSD4 429 aaPredicted RBP16.57■□□□□ 0.24
SMARCC1-201ENST00000254480 C3orf85A0A1B0GTC6 90 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 TNFSF14O43557 240 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 RTP5Q14D33 572 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 C19orf43Q9BQ61 176 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 PCED1AQ9H1Q7 454 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 J3KRW8 73 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 OR5C1Q8NGR4 320 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 IL36GQ9NZH8 169 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 SRD5A2P31213 254 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 GZMKP49863 264 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 VSTM2LQ96N03 204 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 TRPM6Q9BX84 2022 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 SRP14P37108 136 aaKnown RBP16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 DHRS2Q13268 280 aa16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 HLXQ14774 488 aaPredicted RBP16.56■□□□□ 0.24
SMARCC1-201ENST00000254480 MESTQ5EB52 335 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms