RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 OR8S1Q8NH09 359 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 ST6GAL2Q96JF0 529 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 C20orf85Q9H1P6 137 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 IFT46Q9NQC8 304 aa15.52■□□□□ 0.08
VIM-201ENST00000224237 POLEQ07864 2286 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 ZNF736B4DX44 427 aaPredicted RBP15.52■□□□□ 0.07
VIM-201ENST00000224237 DHFRP00374 187 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 CCKARP32238 428 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 MPV17P39210 176 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 ZNF718Q3SXZ3 478 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 ALKBH2Q6NS38 261 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 Q8NFD4 153 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 OR56B4Q8NH76 319 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 ST8SIA4Q92187 359 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 POM121Q96HA1 1249 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 MICU1Q9BPX6 476 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 RTL8AQ9BWD3 113 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 PECRQ9BY49 303 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 MEMO1Q9Y316 297 aa15.52■□□□□ 0.07
VIM-201ENST00000224237 C16orf97H3BN30 126 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 SSX5O60225 188 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 CRYAAP02489 173 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 FCER2P06734 321 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 CA7P43166 264 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 ARFRP1Q13795 201 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 TAF9Q16594 264 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 ATAD3CQ5T2N8 411 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 MBNL2Q5VZF2 373 aaKnown RBP15.51■□□□□ 0.07
VIM-201ENST00000224237 ZNF782Q6ZMW2 699 aaPredicted RBP15.51■□□□□ 0.07
VIM-201ENST00000224237 OR4D10Q8NGI6 311 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 ADAT1Q9BUB4 502 aaKnown RBP15.51■□□□□ 0.07
VIM-201ENST00000224237 PLEKHJ1Q9NW61 149 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 PURGQ9UJV8 347 aaKnown RBP15.51■□□□□ 0.07
VIM-201ENST00000224237 POU2F3Q9UKI9 436 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 HSF4Q9ULV5 492 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 ST3GAL6Q9Y274 331 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 ALG5Q9Y673 324 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 COL6A6A6NMZ7 2263 aa15.51■□□□□ 0.07
VIM-201ENST00000224237 CA11O75493 328 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 RAB3DO95716 219 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 CD74P04233 296 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 H2AFB2P0C5Z0 115 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 KITLGP21583 273 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 GCH1P30793 250 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 CBX5P45973 191 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 RAB25P57735 213 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 ELP2Q6IA86 826 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 SSX8Q7RTT4 187 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 FBXL14Q8N1E6 418 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 PKIBQ9C010 78 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 OR10A4Q9H209 315 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 SPEF1Q9Y4P9 236 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 NPBWR2P48146 333 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 RBM11P57052 281 aaKnown RBP15.5■□□□□ 0.07
VIM-201ENST00000224237 RBMS2Q15434 407 aaKnown RBP15.5■□□□□ 0.07
VIM-201ENST00000224237 PIGYQ3MUY2 71 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 HAGHLQ6PII5 290 aaPredicted RBP15.5■□□□□ 0.07
VIM-201ENST00000224237 GVQW1Q8N7I0 195 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 OR8G5Q8NG78 346 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 SLAMF9Q96A28 289 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 ANAPC10Q9UM13 185 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 RELNP78509 3460 aa15.5■□□□□ 0.07
VIM-201ENST00000224237 KALRNO60229 2985 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 TRAPPC2LH3BP13 241 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 GEMIN2O14893 280 aaKnown RBP15.49■□□□□ 0.07
VIM-201ENST00000224237 NDUFB6O95139 128 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 TBPP20226 339 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 BCL3P20749 454 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 MPZP25189 248 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 IL24Q13007 206 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 MEF2DQ14814 521 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 ALKBH6Q3KRA9 238 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 NKAPLQ5M9Q1 402 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 SIGIRRQ6IA17 410 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 RGS7BPQ6MZT1 257 aaPredicted RBP15.49■□□□□ 0.07
VIM-201ENST00000224237 C6orf201Q7Z4U5 140 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 OR4S1Q8NGB4 309 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 OCSTAMPQ9BR26 566 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 OR51I2Q9H344 312 aa15.49■□□□□ 0.07
VIM-201ENST00000224237 LRP5LA4QPB2 252 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A10PA6NDY2 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A18PA6NE21 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A16PA6NEW6 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A20PA6NIJ5 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A8PA6NJQ4 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A7PA6NKC0 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A22PA8MWA6 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A12PA8MX19 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A5PA8MXJ8 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A23PA8MXZ1 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 TIMM8AO60220 97 aaPredicted RBP15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A15PP0C7V4 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A13PP0C7W8 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A14PP0C7W9 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM90A24PP0C7X0 464 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FGF12P61328 243 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 OR8G1Q15617 311 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 FAM76BQ5HYJ3 339 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 NHLRC3Q5JS37 347 aa15.48■□□□□ 0.07
VIM-201ENST00000224237 OR51S1Q8NGJ8 323 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms