RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 ACP7Q6ZNF0 438 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 C17orf107Q6ZR85 190 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 PDZD9Q8IXQ8 264 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 CCDC54Q8NEL0 328 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 OR51G2Q8NGK0 314 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 OR5D13Q8NGL4 314 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 OR8J1Q8NGP2 316 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 OR14K1Q8NGZ2 314 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 TNFRSF14Q92956 283 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 RFKQ969G6 155 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 GABARAPL3Q9BY60 117 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 MAB21L2Q9Y586 359 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 A0A1B0GTI1 187 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 A0A1W2PPH5 198 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 M0R129 80 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 GPR137BO60478 399 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 IGHV4-59P01825 116 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 PGA5P0DJD9 388 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 CCL1P22362 96 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 HAAOP46952 286 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 ZNF561Q8N587 486 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 YIPF7Q8N8F6 280 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 ZNRF1Q8ND25 227 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 TMEM185AQ8NFB2 350 aa15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 RBM4BQ9BQ04 359 aaKnown RBP15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 SF3B6Q9Y3B4 125 aaKnown RBP15.64■□□□□ 0.09
CCDC28A-203ENST00000617445 PQLC2LA1A4F0 135 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 METTL15A6NJ78 407 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 RFPL4AA6NLU0 287 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 RFPL4AL1F8VTS6 287 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 SLC1A7O00341 560 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 MAGEB4O15481 346 aaPredicted RBP15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 MPZP25189 248 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 ATP6V1E1P36543 226 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 RELBQ01201 579 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 TRUB1Q8WWH5 349 aaKnown RBP15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 WFDC12Q8WWY7 111 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 TAF15Q92804 592 aaKnown RBP eCLIP15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 ZNRD1Q9P1U0 126 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 OAZ3Q9UMX2 235 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 SLC22A13Q9Y226 551 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 TRRAPQ9Y4A5 3859 aa15.63■□□□□ 0.09
CCDC28A-203ENST00000617445 A0A1W2PQL4 384 aaPredicted RBP15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 PAHP00439 452 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 PRDX2P32119 198 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 CAPZA1P52907 286 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 CDC42P60953 191 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 DMRTC1Q5HYR2 192 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 ASRGL1Q7L266 308 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 CATSPERDQ86XM0 798 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 OR5R1Q8NH85 324 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 NRIP2Q9BQI9 281 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 ADI1Q9BV57 179 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 PKIBQ9C010 78 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 SEMA6AQ9H2E6 1030 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 GPR173Q9NS66 373 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 SLC7A11Q9UPY5 501 aa15.62■□□□□ 0.09
CCDC28A-203ENST00000617445 WNK1Q9H4A3 2382 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 hCG_1809904A0A1W2PP81 198 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 A0A1W2PPE2 198 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 A0A1W2PR64 198 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 A0A1W2PRV1 198 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 H0YAE9 185 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 RPP14O95059 124 aaKnown RBP15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 NXPH2O95156 264 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 TFF1P04155 84 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 IL24Q13007 206 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 MIDNQ504T8 468 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 PLEKHG7Q6ZR37 379 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 OR10H4Q8NGA5 316 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 C10orf35Q96D05 121 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 FAM234AQ9H0X4 552 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 RIBC2Q9H4K1 309 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 PLEKHA1Q9HB21 404 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 HES4Q9HCC6 221 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 VPREB3Q9UKI3 123 aa15.61■□□□□ 0.09
CCDC28A-203ENST00000617445 MEIOCA2RUB1 952 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 ANKRD61A6NGH8 418 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 SYT7O43581 403 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 SYNGR1O43759 233 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 GATBO75879 557 aaKnown RBP15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 SERPINA3P01011 423 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 SAA4P35542 130 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 POLR2IP36954 125 aaKnown RBP15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 RPL31P62899 125 aaKnown RBP15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 OCLNQ16625 522 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 TREML4Q6UXN2 200 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 SSX6Q7RTT6 188 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 CALHM1Q8IU99 346 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 FAM185AQ8N0U4 392 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 CD177Q8N6Q3 437 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 ZSCAN4Q8NAM6 433 aaPredicted RBP15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 EME1Q96AY2 570 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 TBX5Q99593 518 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 HEXA-AS1Q9H8Q6 139 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 RNF114Q9Y508 228 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 ORC6Q9Y5N6 252 aa15.6■□□□□ 0.09
CCDC28A-203ENST00000617445 TGFBR2P37173 567 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 FUT6P51993 359 aa15.59■□□□□ 0.09
CCDC28A-203ENST00000617445 ERVK11-1P61568 191 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms